Protein–RNA interactions for Protein: Q8CCJ3

Ufl1, E3 UFM1-protein ligase 1, mousemouse

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufl1Q8CCJ3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ufl1Q8CCJ3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.78■■□□□ 1.08
Ufl1Q8CCJ3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ufl1Q8CCJ3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ufl1Q8CCJ3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Ufl1Q8CCJ3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ufl1Q8CCJ3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Ufl1Q8CCJ3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Ufl1Q8CCJ3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ufl1Q8CCJ3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
Ufl1Q8CCJ3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ufl1Q8CCJ3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.77■■□□□ 1.08
Ufl1Q8CCJ3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.77■■□□□ 1.08
Ufl1Q8CCJ3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Ufl1Q8CCJ3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.77■■□□□ 1.08
Ufl1Q8CCJ3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.77■■□□□ 1.08
Ufl1Q8CCJ3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.77■■□□□ 1.08
Ufl1Q8CCJ3 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.77■■□□□ 1.08
Ufl1Q8CCJ3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ufl1Q8CCJ3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ufl1Q8CCJ3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ufl1Q8CCJ3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ufl1Q8CCJ3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Ufl1Q8CCJ3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ufl1Q8CCJ3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ufl1Q8CCJ3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.07
Ufl1Q8CCJ3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 Mir6349-201ENSMUST00000184059 97 ntBASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.76■■□□□ 1.07
Ufl1Q8CCJ3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ufl1Q8CCJ3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ufl1Q8CCJ3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.75■■□□□ 1.07
Ufl1Q8CCJ3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.75■■□□□ 1.07
Ufl1Q8CCJ3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ufl1Q8CCJ3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Ufl1Q8CCJ3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Ufl1Q8CCJ3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.75■■□□□ 1.07
Ufl1Q8CCJ3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ufl1Q8CCJ3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ufl1Q8CCJ3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
Ufl1Q8CCJ3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ufl1Q8CCJ3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ufl1Q8CCJ3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ufl1Q8CCJ3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.74■■□□□ 1.07
Ufl1Q8CCJ3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ufl1Q8CCJ3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ufl1Q8CCJ3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ufl1Q8CCJ3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ufl1Q8CCJ3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ufl1Q8CCJ3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.74■■□□□ 1.07
Ufl1Q8CCJ3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.73■■□□□ 1.07
Ufl1Q8CCJ3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ufl1Q8CCJ3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ufl1Q8CCJ3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ufl1Q8CCJ3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ufl1Q8CCJ3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ufl1Q8CCJ3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.72■■□□□ 1.07
Ufl1Q8CCJ3 Gm12382-201ENSMUST00000122005 922 ntBASIC21.72■■□□□ 1.07
Ufl1Q8CCJ3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ufl1Q8CCJ3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
Ufl1Q8CCJ3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Ufl1Q8CCJ3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ufl1Q8CCJ3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.72■■□□□ 1.07
Ufl1Q8CCJ3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ufl1Q8CCJ3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ufl1Q8CCJ3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ufl1Q8CCJ3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms