Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf31Q8CCF0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.83■□□□□ 0.76
Prpf31Q8CCF0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf31Q8CCF0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf31Q8CCF0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf31Q8CCF0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf31Q8CCF0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf31Q8CCF0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf31Q8CCF0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf31Q8CCF0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.82■□□□□ 0.76
Prpf31Q8CCF0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.82■□□□□ 0.76
Prpf31Q8CCF0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.82■□□□□ 0.76
Prpf31Q8CCF0 Gm10252-201ENSMUST00000209541 832 ntBASIC19.82■□□□□ 0.76
Prpf31Q8CCF0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Prpf31Q8CCF0 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.82■□□□□ 0.76
Prpf31Q8CCF0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf31Q8CCF0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf31Q8CCF0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf31Q8CCF0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Prpf31Q8CCF0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.82■□□□□ 0.76
Prpf31Q8CCF0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 Gm15378-201ENSMUST00000121894 207 ntBASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf31Q8CCF0 Golph3-205ENSMUST00000228671 2842 ntBASIC19.8■□□□□ 0.76
Prpf31Q8CCF0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Prpf31Q8CCF0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Prpf31Q8CCF0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf31Q8CCF0 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.8■□□□□ 0.76
Prpf31Q8CCF0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Prpf31Q8CCF0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.8■□□□□ 0.76
Prpf31Q8CCF0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.8■□□□□ 0.76
Prpf31Q8CCF0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.8■□□□□ 0.76
Prpf31Q8CCF0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf31Q8CCF0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf31Q8CCF0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.8■□□□□ 0.76
Prpf31Q8CCF0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.8■□□□□ 0.76
Prpf31Q8CCF0 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.79■□□□□ 0.76
Prpf31Q8CCF0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf31Q8CCF0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf31Q8CCF0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf31Q8CCF0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf31Q8CCF0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf31Q8CCF0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf31Q8CCF0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf31Q8CCF0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf31Q8CCF0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.79■□□□□ 0.76
Prpf31Q8CCF0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf31Q8CCF0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.79■□□□□ 0.76
Prpf31Q8CCF0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf31Q8CCF0 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.79■□□□□ 0.76
Prpf31Q8CCF0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf31Q8CCF0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf31Q8CCF0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf31Q8CCF0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf31Q8CCF0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf31Q8CCF0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf31Q8CCF0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Prpf31Q8CCF0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.78■□□□□ 0.76
Prpf31Q8CCF0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf31Q8CCF0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Prpf31Q8CCF0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf31Q8CCF0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf31Q8CCF0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf31Q8CCF0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf31Q8CCF0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf31Q8CCF0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf31Q8CCF0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Prpf31Q8CCF0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Prpf31Q8CCF0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf31Q8CCF0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf31Q8CCF0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Prpf31Q8CCF0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Prpf31Q8CCF0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf31Q8CCF0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf31Q8CCF0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf31Q8CCF0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf31Q8CCF0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf31Q8CCF0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf31Q8CCF0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.77■□□□□ 0.76
Prpf31Q8CCF0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Prpf31Q8CCF0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Prpf31Q8CCF0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Prpf31Q8CCF0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms