Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a6Q8C6K9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a6Q8C6K9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a6Q8C6K9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Col6a6Q8C6K9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a6Q8C6K9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Col6a6Q8C6K9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Col6a6Q8C6K9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a6Q8C6K9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Col6a6Q8C6K9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a6Q8C6K9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a6Q8C6K9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Col6a6Q8C6K9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.35■□□□□ 0.21
Col6a6Q8C6K9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a6Q8C6K9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a6Q8C6K9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a6Q8C6K9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a6Q8C6K9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a6Q8C6K9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Gm38027-201ENSMUST00000192315 235 ntBASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Gm33142-201ENSMUST00000193913 867 ntBASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a6Q8C6K9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Col6a6Q8C6K9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col6a6Q8C6K9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col6a6Q8C6K9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.33■□□□□ 0.2
Col6a6Q8C6K9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col6a6Q8C6K9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col6a6Q8C6K9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col6a6Q8C6K9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Col6a6Q8C6K9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col6a6Q8C6K9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col6a6Q8C6K9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col6a6Q8C6K9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col6a6Q8C6K9 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.33■□□□□ 0.2
Col6a6Q8C6K9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col6a6Q8C6K9 Gm7284-201ENSMUST00000131667 944 ntBASIC16.33■□□□□ 0.2
Col6a6Q8C6K9 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.33■□□□□ 0.2
Col6a6Q8C6K9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Col6a6Q8C6K9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a6Q8C6K9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Col6a6Q8C6K9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a6Q8C6K9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a6Q8C6K9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a6Q8C6K9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Col6a6Q8C6K9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Col6a6Q8C6K9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a6Q8C6K9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a6Q8C6K9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a6Q8C6K9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a6Q8C6K9 Gm38285-201ENSMUST00000192928 922 ntBASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a6Q8C6K9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a6Q8C6K9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a6Q8C6K9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a6Q8C6K9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a6Q8C6K9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a6Q8C6K9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a6Q8C6K9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a6Q8C6K9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Col6a6Q8C6K9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Col6a6Q8C6K9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a6Q8C6K9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a6Q8C6K9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a6Q8C6K9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Col6a6Q8C6K9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms