Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC23.13■■□□□ 1.29
Ccdc60Q8C4J0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc60Q8C4J0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc60Q8C4J0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc60Q8C4J0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Ccdc60Q8C4J0 Gm44544-201ENSMUST00000207052 1844 ntBASIC23.12■■□□□ 1.29
Ccdc60Q8C4J0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc60Q8C4J0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Ccdc60Q8C4J0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC23.12■■□□□ 1.29
Ccdc60Q8C4J0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc60Q8C4J0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc60Q8C4J0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC23.12■■□□□ 1.29
Ccdc60Q8C4J0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Ccdc60Q8C4J0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc60Q8C4J0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC23.12■■□□□ 1.29
Ccdc60Q8C4J0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc60Q8C4J0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc60Q8C4J0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Ccdc60Q8C4J0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
Ccdc60Q8C4J0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Ccdc60Q8C4J0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc60Q8C4J0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
Ccdc60Q8C4J0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc60Q8C4J0 Tgds-204ENSMUST00000228543 1594 ntBASIC23.11■■□□□ 1.29
Ccdc60Q8C4J0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc60Q8C4J0 Dio3-201ENSMUST00000097228 1449 ntBASIC23.11■■□□□ 1.29
Ccdc60Q8C4J0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc60Q8C4J0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC23.11■■□□□ 1.29
Ccdc60Q8C4J0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc60Q8C4J0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc60Q8C4J0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc60Q8C4J0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc60Q8C4J0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc60Q8C4J0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc60Q8C4J0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc60Q8C4J0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc60Q8C4J0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Ccdc60Q8C4J0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc60Q8C4J0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc60Q8C4J0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc60Q8C4J0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC23.1■■□□□ 1.29
Ccdc60Q8C4J0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc60Q8C4J0 Gm27275-201ENSMUST00000184318 272 ntBASIC23.1■■□□□ 1.29
Ccdc60Q8C4J0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc60Q8C4J0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc60Q8C4J0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc60Q8C4J0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC23.1■■□□□ 1.29
Ccdc60Q8C4J0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc60Q8C4J0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc60Q8C4J0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC23.09■■□□□ 1.29
Ccdc60Q8C4J0 Gm15847-201ENSMUST00000121417 1065 ntBASIC23.09■■□□□ 1.29
Ccdc60Q8C4J0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc60Q8C4J0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc60Q8C4J0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc60Q8C4J0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Ccdc60Q8C4J0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc60Q8C4J0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC23.08■■□□□ 1.29
Ccdc60Q8C4J0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc60Q8C4J0 Gm12669-201ENSMUST00000122162 1009 ntBASIC23.08■■□□□ 1.29
Ccdc60Q8C4J0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC23.08■■□□□ 1.29
Ccdc60Q8C4J0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc60Q8C4J0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc60Q8C4J0 Flg-201ENSMUST00000050758 1488 ntBASIC23.08■■□□□ 1.29
Ccdc60Q8C4J0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Ccdc60Q8C4J0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc60Q8C4J0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
Ccdc60Q8C4J0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ccdc60Q8C4J0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc60Q8C4J0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC23.07■■□□□ 1.28
Ccdc60Q8C4J0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc60Q8C4J0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC23.07■■□□□ 1.28
Ccdc60Q8C4J0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC23.07■■□□□ 1.28
Ccdc60Q8C4J0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc60Q8C4J0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC23.07■■□□□ 1.28
Ccdc60Q8C4J0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc60Q8C4J0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc60Q8C4J0 Zfp783-201ENSMUST00000095946 670 ntBASIC23.07■■□□□ 1.28
Ccdc60Q8C4J0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc60Q8C4J0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc60Q8C4J0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc60Q8C4J0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc60Q8C4J0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Ccdc60Q8C4J0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc60Q8C4J0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc60Q8C4J0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc60Q8C4J0 Gm11927-201ENSMUST00000118472 759 ntBASIC23.06■■□□□ 1.28
Ccdc60Q8C4J0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc60Q8C4J0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc60Q8C4J0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc60Q8C4J0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Ccdc60Q8C4J0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc60Q8C4J0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Ccdc60Q8C4J0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Ccdc60Q8C4J0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc60Q8C4J0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc60Q8C4J0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc60Q8C4J0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Ccdc60Q8C4J0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Ccdc60Q8C4J0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC23.05■■□□□ 1.28
Ccdc60Q8C4J0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms