Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.31■■□□□ 1
Usp44Q8C2S0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp44Q8C2S0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.3■■□□□ 1
Usp44Q8C2S0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.3■■□□□ 1
Usp44Q8C2S0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.3■■□□□ 1
Usp44Q8C2S0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.3■■□□□ 1
Usp44Q8C2S0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.3■■□□□ 1
Usp44Q8C2S0 Gm20049-201ENSMUST00000219950 730 ntBASIC21.3■■□□□ 1
Usp44Q8C2S0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp44Q8C2S0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.3■■□□□ 1
Usp44Q8C2S0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp44Q8C2S0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp44Q8C2S0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp44Q8C2S0 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.3■■□□□ 1
Usp44Q8C2S0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp44Q8C2S0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp44Q8C2S0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Usp44Q8C2S0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Usp44Q8C2S0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Usp44Q8C2S0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp44Q8C2S0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.29■■□□□ 1
Usp44Q8C2S0 Gm12527-201ENSMUST00000117967 564 ntBASIC21.29■■□□□ 1
Usp44Q8C2S0 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.29■■□□□ 1
Usp44Q8C2S0 Gm2559-201ENSMUST00000201323 363 ntBASIC21.29■■□□□ 1
Usp44Q8C2S0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.29■■□□□ 1
Usp44Q8C2S0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp44Q8C2S0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Usp44Q8C2S0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Usp44Q8C2S0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp44Q8C2S0 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.28■■□□□ 1
Usp44Q8C2S0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Usp44Q8C2S0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Usp44Q8C2S0 Gm12896-201ENSMUST00000118430 226 ntBASIC21.28■■□□□ 1
Usp44Q8C2S0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.28■■□□□ 1
Usp44Q8C2S0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp44Q8C2S0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Usp44Q8C2S0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Usp44Q8C2S0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Usp44Q8C2S0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.28■■□□□ 1
Usp44Q8C2S0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Usp44Q8C2S0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp44Q8C2S0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.27■■□□□ 1
Usp44Q8C2S0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.27■■□□□ 1
Usp44Q8C2S0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp44Q8C2S0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.27■■□□□ 1
Usp44Q8C2S0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Usp44Q8C2S0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.27■■□□□ 1
Usp44Q8C2S0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp44Q8C2S0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.27■■□□□ 1
Usp44Q8C2S0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Usp44Q8C2S0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp44Q8C2S0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Usp44Q8C2S0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.27■□□□□ 0.99
Usp44Q8C2S0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Usp44Q8C2S0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp44Q8C2S0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Usp44Q8C2S0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Usp44Q8C2S0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.26■□□□□ 0.99
Usp44Q8C2S0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Usp44Q8C2S0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Usp44Q8C2S0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Usp44Q8C2S0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp44Q8C2S0 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.26■□□□□ 0.99
Usp44Q8C2S0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Usp44Q8C2S0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
Usp44Q8C2S0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Gm11249-201ENSMUST00000117071 859 ntBASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp44Q8C2S0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp44Q8C2S0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.24■□□□□ 0.99
Usp44Q8C2S0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp44Q8C2S0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.24■□□□□ 0.99
Usp44Q8C2S0 Mtag2-201ENSMUST00000058665 714 ntBASIC21.24■□□□□ 0.99
Usp44Q8C2S0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp44Q8C2S0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.24■□□□□ 0.99
Usp44Q8C2S0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp44Q8C2S0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Usp44Q8C2S0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp44Q8C2S0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp44Q8C2S0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp44Q8C2S0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Usp44Q8C2S0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp44Q8C2S0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp44Q8C2S0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp44Q8C2S0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms