Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptcd1Q8C2E4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptcd1Q8C2E4 Gm10138-203ENSMUST00000206952 366 ntBASIC22.35■■□□□ 1.17
Ptcd1Q8C2E4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptcd1Q8C2E4 Gm18025-201ENSMUST00000221733 862 ntBASIC22.35■■□□□ 1.17
Ptcd1Q8C2E4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptcd1Q8C2E4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptcd1Q8C2E4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptcd1Q8C2E4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptcd1Q8C2E4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Ptcd1Q8C2E4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
Ptcd1Q8C2E4 Gm42545-201ENSMUST00000202755 922 ntBASIC22.34■■□□□ 1.17
Ptcd1Q8C2E4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC22.34■■□□□ 1.17
Ptcd1Q8C2E4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptcd1Q8C2E4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptcd1Q8C2E4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptcd1Q8C2E4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ptcd1Q8C2E4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptcd1Q8C2E4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ptcd1Q8C2E4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptcd1Q8C2E4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptcd1Q8C2E4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptcd1Q8C2E4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ptcd1Q8C2E4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ptcd1Q8C2E4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptcd1Q8C2E4 Timm23-208ENSMUST00000226683 750 ntBASIC22.33■■□□□ 1.17
Ptcd1Q8C2E4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Ptcd1Q8C2E4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC22.33■■□□□ 1.17
Ptcd1Q8C2E4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Ptcd1Q8C2E4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Ptcd1Q8C2E4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ptcd1Q8C2E4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ptcd1Q8C2E4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ptcd1Q8C2E4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ptcd1Q8C2E4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Ptcd1Q8C2E4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ptcd1Q8C2E4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC22.32■■□□□ 1.16
Ptcd1Q8C2E4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Ptcd1Q8C2E4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Ptcd1Q8C2E4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ptcd1Q8C2E4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Ptcd1Q8C2E4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC22.32■■□□□ 1.16
Ptcd1Q8C2E4 Otx2os1-204ENSMUST00000227221 751 ntBASIC22.32■■□□□ 1.16
Ptcd1Q8C2E4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Ptcd1Q8C2E4 Zfp783-201ENSMUST00000095946 670 ntBASIC22.32■■□□□ 1.16
Ptcd1Q8C2E4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ptcd1Q8C2E4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptcd1Q8C2E4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptcd1Q8C2E4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ptcd1Q8C2E4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ptcd1Q8C2E4 Gm10517-202ENSMUST00000192970 758 ntBASIC22.31■■□□□ 1.16
Ptcd1Q8C2E4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptcd1Q8C2E4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptcd1Q8C2E4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptcd1Q8C2E4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptcd1Q8C2E4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ptcd1Q8C2E4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ptcd1Q8C2E4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptcd1Q8C2E4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptcd1Q8C2E4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ptcd1Q8C2E4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ptcd1Q8C2E4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC22.3■■□□□ 1.16
Ptcd1Q8C2E4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
Ptcd1Q8C2E4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ptcd1Q8C2E4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ptcd1Q8C2E4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC22.3■■□□□ 1.16
Ptcd1Q8C2E4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ptcd1Q8C2E4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC22.3■■□□□ 1.16
Ptcd1Q8C2E4 Gm7712-202ENSMUST00000222331 1510 ntBASIC22.3■■□□□ 1.16
Ptcd1Q8C2E4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ptcd1Q8C2E4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ptcd1Q8C2E4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC22.3■■□□□ 1.16
Ptcd1Q8C2E4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 BC021767-201ENSMUST00000126387 1716 ntBASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Gm15375-201ENSMUST00000119510 849 ntBASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Gm3375-201ENSMUST00000203929 796 ntBASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptcd1Q8C2E4 Gm45560-201ENSMUST00000211492 1472 ntBASIC22.28■■□□□ 1.16
Ptcd1Q8C2E4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ptcd1Q8C2E4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Ptcd1Q8C2E4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms