Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.86■□□□□ 0.61
Sh3rf3Q8C120 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Sh3rf3Q8C120 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3rf3Q8C120 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.86■□□□□ 0.61
Sh3rf3Q8C120 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3rf3Q8C120 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sh3rf3Q8C120 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3rf3Q8C120 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3rf3Q8C120 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3rf3Q8C120 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3rf3Q8C120 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sh3rf3Q8C120 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3rf3Q8C120 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sh3rf3Q8C120 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.85■□□□□ 0.61
Sh3rf3Q8C120 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3rf3Q8C120 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3rf3Q8C120 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3rf3Q8C120 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3rf3Q8C120 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3rf3Q8C120 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sh3rf3Q8C120 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3rf3Q8C120 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Gm7290-201ENSMUST00000104990 617 ntBASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Gm12918-201ENSMUST00000120234 636 ntBASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Gm15710-201ENSMUST00000121821 636 ntBASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Gm5075-201ENSMUST00000196916 622 ntBASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf3Q8C120 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3rf3Q8C120 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.83■□□□□ 0.61
Sh3rf3Q8C120 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Sh3rf3Q8C120 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3rf3Q8C120 Mir5133-201ENSMUST00000174955 77 ntBASIC18.83■□□□□ 0.6
Sh3rf3Q8C120 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3rf3Q8C120 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3rf3Q8C120 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3rf3Q8C120 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3rf3Q8C120 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Sh3rf3Q8C120 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Sh3rf3Q8C120 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3rf3Q8C120 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3rf3Q8C120 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3rf3Q8C120 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3rf3Q8C120 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3rf3Q8C120 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3rf3Q8C120 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3rf3Q8C120 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3rf3Q8C120 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sh3rf3Q8C120 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Sh3rf3Q8C120 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sh3rf3Q8C120 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3rf3Q8C120 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf3Q8C120 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Sh3rf3Q8C120 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sh3rf3Q8C120 Gm22325-201ENSMUST00000158904 308 ntBASIC18.81■□□□□ 0.6
Sh3rf3Q8C120 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sh3rf3Q8C120 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.81■□□□□ 0.6
Sh3rf3Q8C120 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sh3rf3Q8C120 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sh3rf3Q8C120 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf3Q8C120 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sh3rf3Q8C120 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf3Q8C120 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3rf3Q8C120 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3rf3Q8C120 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sh3rf3Q8C120 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Sh3rf3Q8C120 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Sh3rf3Q8C120 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3rf3Q8C120 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3rf3Q8C120 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.8■□□□□ 0.6
Sh3rf3Q8C120 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3rf3Q8C120 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3rf3Q8C120 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3rf3Q8C120 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3rf3Q8C120 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3rf3Q8C120 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3rf3Q8C120 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3rf3Q8C120 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sh3rf3Q8C120 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3rf3Q8C120 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3rf3Q8C120 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms