Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf2Q8BZT2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf2Q8BZT2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf2Q8BZT2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Mir5122-201ENSMUST00000175004 89 ntBASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3rf2Q8BZT2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3rf2Q8BZT2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3rf2Q8BZT2 Gm15565-201ENSMUST00000118890 427 ntBASIC18.36■□□□□ 0.53
Sh3rf2Q8BZT2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3rf2Q8BZT2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3rf2Q8BZT2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.36■□□□□ 0.53
Sh3rf2Q8BZT2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.36■□□□□ 0.53
Sh3rf2Q8BZT2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.36■□□□□ 0.53
Sh3rf2Q8BZT2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.36■□□□□ 0.53
Sh3rf2Q8BZT2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.36■□□□□ 0.53
Sh3rf2Q8BZT2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3rf2Q8BZT2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3rf2Q8BZT2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sh3rf2Q8BZT2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3rf2Q8BZT2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3rf2Q8BZT2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3rf2Q8BZT2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3rf2Q8BZT2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.35■□□□□ 0.53
Sh3rf2Q8BZT2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sh3rf2Q8BZT2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.35■□□□□ 0.53
Sh3rf2Q8BZT2 Mir6349-201ENSMUST00000184059 97 ntBASIC18.35■□□□□ 0.53
Sh3rf2Q8BZT2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3rf2Q8BZT2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Sh3rf2Q8BZT2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3rf2Q8BZT2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3rf2Q8BZT2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3rf2Q8BZT2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3rf2Q8BZT2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3rf2Q8BZT2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3rf2Q8BZT2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Sh3rf2Q8BZT2 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.33■□□□□ 0.53
Sh3rf2Q8BZT2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3rf2Q8BZT2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3rf2Q8BZT2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3rf2Q8BZT2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3rf2Q8BZT2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3rf2Q8BZT2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.33■□□□□ 0.52
Sh3rf2Q8BZT2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.33■□□□□ 0.52
Sh3rf2Q8BZT2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Sh3rf2Q8BZT2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.33■□□□□ 0.52
Sh3rf2Q8BZT2 Gm37292-201ENSMUST00000192062 758 ntBASIC18.33■□□□□ 0.52
Sh3rf2Q8BZT2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3rf2Q8BZT2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3rf2Q8BZT2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Sh3rf2Q8BZT2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3rf2Q8BZT2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3rf2Q8BZT2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3rf2Q8BZT2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Sh3rf2Q8BZT2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3rf2Q8BZT2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3rf2Q8BZT2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Sh3rf2Q8BZT2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.33■□□□□ 0.52
Sh3rf2Q8BZT2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.33■□□□□ 0.52
Sh3rf2Q8BZT2 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms