Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpsf7Q8BTV2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpsf7Q8BTV2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpsf7Q8BTV2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpsf7Q8BTV2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cpsf7Q8BTV2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cpsf7Q8BTV2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cpsf7Q8BTV2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.14■□□□□ 0.49
Cpsf7Q8BTV2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpsf7Q8BTV2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cpsf7Q8BTV2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpsf7Q8BTV2 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.14■□□□□ 0.49
Cpsf7Q8BTV2 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.14■□□□□ 0.49
Cpsf7Q8BTV2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpsf7Q8BTV2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cpsf7Q8BTV2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpsf7Q8BTV2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cpsf7Q8BTV2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cpsf7Q8BTV2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpsf7Q8BTV2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpsf7Q8BTV2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf7Q8BTV2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Cpsf7Q8BTV2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf7Q8BTV2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf7Q8BTV2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.13■□□□□ 0.49
Cpsf7Q8BTV2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Cpsf7Q8BTV2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf7Q8BTV2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf7Q8BTV2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Cpsf7Q8BTV2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf7Q8BTV2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf7Q8BTV2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf7Q8BTV2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Cpsf7Q8BTV2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.13■□□□□ 0.49
Cpsf7Q8BTV2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf7Q8BTV2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf7Q8BTV2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf7Q8BTV2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cpsf7Q8BTV2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf7Q8BTV2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf7Q8BTV2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf7Q8BTV2 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.11■□□□□ 0.49
Cpsf7Q8BTV2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.11■□□□□ 0.49
Cpsf7Q8BTV2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
Cpsf7Q8BTV2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf7Q8BTV2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf7Q8BTV2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf7Q8BTV2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Cpsf7Q8BTV2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf7Q8BTV2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf7Q8BTV2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cpsf7Q8BTV2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf7Q8BTV2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf7Q8BTV2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf7Q8BTV2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf7Q8BTV2 Gm38205-201ENSMUST00000192243 258 ntBASIC18.1■□□□□ 0.49
Cpsf7Q8BTV2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cpsf7Q8BTV2 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.1■□□□□ 0.49
Cpsf7Q8BTV2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cpsf7Q8BTV2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf7Q8BTV2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf7Q8BTV2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf7Q8BTV2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Cpsf7Q8BTV2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.09■□□□□ 0.49
Cpsf7Q8BTV2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf7Q8BTV2 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.09■□□□□ 0.49
Cpsf7Q8BTV2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf7Q8BTV2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cpsf7Q8BTV2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf7Q8BTV2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.09■□□□□ 0.49
Cpsf7Q8BTV2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf7Q8BTV2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf7Q8BTV2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf7Q8BTV2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf7Q8BTV2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf7Q8BTV2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cpsf7Q8BTV2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cpsf7Q8BTV2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpsf7Q8BTV2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cpsf7Q8BTV2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpsf7Q8BTV2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cpsf7Q8BTV2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpsf7Q8BTV2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms