Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scfd1Q8BRF7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scfd1Q8BRF7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scfd1Q8BRF7 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.78■□□□□ 0.92
Scfd1Q8BRF7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scfd1Q8BRF7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scfd1Q8BRF7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Scfd1Q8BRF7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scfd1Q8BRF7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scfd1Q8BRF7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scfd1Q8BRF7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scfd1Q8BRF7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scfd1Q8BRF7 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.77■□□□□ 0.92
Scfd1Q8BRF7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.77■□□□□ 0.92
Scfd1Q8BRF7 Mir2861-201ENSMUST00000175539 82 ntBASIC20.77■□□□□ 0.92
Scfd1Q8BRF7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Scfd1Q8BRF7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scfd1Q8BRF7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Scfd1Q8BRF7 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.77■□□□□ 0.92
Scfd1Q8BRF7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scfd1Q8BRF7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Scfd1Q8BRF7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scfd1Q8BRF7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scfd1Q8BRF7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scfd1Q8BRF7 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.76■□□□□ 0.91
Scfd1Q8BRF7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scfd1Q8BRF7 Gm15565-201ENSMUST00000118890 427 ntBASIC20.76■□□□□ 0.91
Scfd1Q8BRF7 Gm12382-201ENSMUST00000122005 922 ntBASIC20.76■□□□□ 0.91
Scfd1Q8BRF7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scfd1Q8BRF7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.76■□□□□ 0.91
Scfd1Q8BRF7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.76■□□□□ 0.91
Scfd1Q8BRF7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scfd1Q8BRF7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scfd1Q8BRF7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Scfd1Q8BRF7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.76■□□□□ 0.91
Scfd1Q8BRF7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scfd1Q8BRF7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Scfd1Q8BRF7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scfd1Q8BRF7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scfd1Q8BRF7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scfd1Q8BRF7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Scfd1Q8BRF7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Scfd1Q8BRF7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.75■□□□□ 0.91
Scfd1Q8BRF7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.75■□□□□ 0.91
Scfd1Q8BRF7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Scfd1Q8BRF7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scfd1Q8BRF7 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.75■□□□□ 0.91
Scfd1Q8BRF7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scfd1Q8BRF7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Scfd1Q8BRF7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scfd1Q8BRF7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scfd1Q8BRF7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scfd1Q8BRF7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scfd1Q8BRF7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scfd1Q8BRF7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.74■□□□□ 0.91
Scfd1Q8BRF7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scfd1Q8BRF7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scfd1Q8BRF7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scfd1Q8BRF7 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.74■□□□□ 0.91
Scfd1Q8BRF7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scfd1Q8BRF7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scfd1Q8BRF7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scfd1Q8BRF7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scfd1Q8BRF7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scfd1Q8BRF7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scfd1Q8BRF7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scfd1Q8BRF7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.73■□□□□ 0.91
Scfd1Q8BRF7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.73■□□□□ 0.91
Scfd1Q8BRF7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scfd1Q8BRF7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scfd1Q8BRF7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scfd1Q8BRF7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scfd1Q8BRF7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scfd1Q8BRF7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scfd1Q8BRF7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scfd1Q8BRF7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scfd1Q8BRF7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Scfd1Q8BRF7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scfd1Q8BRF7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scfd1Q8BRF7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Scfd1Q8BRF7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scfd1Q8BRF7 Gm21814-202ENSMUST00000203277 873 ntBASIC20.72■□□□□ 0.91
Scfd1Q8BRF7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scfd1Q8BRF7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scfd1Q8BRF7 Gm5417-201ENSMUST00000079706 384 ntBASIC20.72■□□□□ 0.91
Scfd1Q8BRF7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scfd1Q8BRF7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scfd1Q8BRF7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.72■□□□□ 0.91
Scfd1Q8BRF7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scfd1Q8BRF7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scfd1Q8BRF7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scfd1Q8BRF7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scfd1Q8BRF7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Scfd1Q8BRF7 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.71■□□□□ 0.91
Scfd1Q8BRF7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scfd1Q8BRF7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.71■□□□□ 0.91
Scfd1Q8BRF7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scfd1Q8BRF7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scfd1Q8BRF7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scfd1Q8BRF7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms