Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Suds3Q8BR65 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Suds3Q8BR65 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Suds3Q8BR65 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Suds3Q8BR65 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Suds3Q8BR65 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Suds3Q8BR65 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Suds3Q8BR65 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Suds3Q8BR65 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Suds3Q8BR65 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.57■□□□□ 0.56
Suds3Q8BR65 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.57■□□□□ 0.56
Suds3Q8BR65 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.57■□□□□ 0.56
Suds3Q8BR65 Grk6-206ENSMUST00000224995 2971 ntBASIC18.57■□□□□ 0.56
Suds3Q8BR65 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Suds3Q8BR65 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Suds3Q8BR65 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Suds3Q8BR65 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.57■□□□□ 0.56
Suds3Q8BR65 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Suds3Q8BR65 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Suds3Q8BR65 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.57■□□□□ 0.56
Suds3Q8BR65 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Suds3Q8BR65 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Suds3Q8BR65 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Suds3Q8BR65 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Suds3Q8BR65 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Suds3Q8BR65 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Suds3Q8BR65 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Suds3Q8BR65 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.56■□□□□ 0.56
Suds3Q8BR65 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Suds3Q8BR65 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Suds3Q8BR65 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Suds3Q8BR65 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Suds3Q8BR65 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Suds3Q8BR65 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Suds3Q8BR65 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Suds3Q8BR65 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.56■□□□□ 0.56
Suds3Q8BR65 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Suds3Q8BR65 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Suds3Q8BR65 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Suds3Q8BR65 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Suds3Q8BR65 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Suds3Q8BR65 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Suds3Q8BR65 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Suds3Q8BR65 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Suds3Q8BR65 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Suds3Q8BR65 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.55■□□□□ 0.56
Suds3Q8BR65 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Suds3Q8BR65 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.55■□□□□ 0.56
Suds3Q8BR65 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Suds3Q8BR65 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Suds3Q8BR65 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Suds3Q8BR65 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Suds3Q8BR65 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Suds3Q8BR65 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Suds3Q8BR65 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Suds3Q8BR65 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Suds3Q8BR65 Mir5133-201ENSMUST00000174955 77 ntBASIC18.54■□□□□ 0.56
Suds3Q8BR65 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Suds3Q8BR65 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Suds3Q8BR65 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Suds3Q8BR65 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Suds3Q8BR65 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Suds3Q8BR65 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Suds3Q8BR65 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Suds3Q8BR65 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Suds3Q8BR65 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Suds3Q8BR65 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Suds3Q8BR65 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Suds3Q8BR65 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Suds3Q8BR65 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Suds3Q8BR65 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Suds3Q8BR65 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Suds3Q8BR65 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.53■□□□□ 0.56
Suds3Q8BR65 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Suds3Q8BR65 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Suds3Q8BR65 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.53■□□□□ 0.56
Suds3Q8BR65 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Suds3Q8BR65 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Suds3Q8BR65 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Suds3Q8BR65 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Suds3Q8BR65 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.53■□□□□ 0.56
Suds3Q8BR65 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Suds3Q8BR65 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Suds3Q8BR65 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Suds3Q8BR65 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Suds3Q8BR65 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Suds3Q8BR65 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Suds3Q8BR65 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.52■□□□□ 0.56
Suds3Q8BR65 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Suds3Q8BR65 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Suds3Q8BR65 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.52■□□□□ 0.56
Suds3Q8BR65 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Suds3Q8BR65 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Suds3Q8BR65 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Suds3Q8BR65 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Suds3Q8BR65 Gm6365-201ENSMUST00000054711 744 ntBASIC18.52■□□□□ 0.56
Suds3Q8BR65 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Suds3Q8BR65 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Suds3Q8BR65 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
Suds3Q8BR65 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms