Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ckap4Q8BMK4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ckap4Q8BMK4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ckap4Q8BMK4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap4Q8BMK4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.15■□□□□ 0.34
Ckap4Q8BMK4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap4Q8BMK4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap4Q8BMK4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.15■□□□□ 0.34
Ckap4Q8BMK4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.15■□□□□ 0.34
Ckap4Q8BMK4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap4Q8BMK4 Gm42778-201ENSMUST00000199644 553 ntBASIC17.15■□□□□ 0.34
Ckap4Q8BMK4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.15■□□□□ 0.34
Ckap4Q8BMK4 Gm10493-201ENSMUST00000097270 612 ntBASIC17.15■□□□□ 0.34
Ckap4Q8BMK4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap4Q8BMK4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap4Q8BMK4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap4Q8BMK4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap4Q8BMK4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap4Q8BMK4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap4Q8BMK4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap4Q8BMK4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ckap4Q8BMK4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Ckap4Q8BMK4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap4Q8BMK4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap4Q8BMK4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap4Q8BMK4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap4Q8BMK4 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.14■□□□□ 0.33
Ckap4Q8BMK4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap4Q8BMK4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
Ckap4Q8BMK4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.14■□□□□ 0.33
Ckap4Q8BMK4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap4Q8BMK4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap4Q8BMK4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ckap4Q8BMK4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap4Q8BMK4 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.14■□□□□ 0.33
Ckap4Q8BMK4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.14■□□□□ 0.33
Ckap4Q8BMK4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap4Q8BMK4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap4Q8BMK4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ckap4Q8BMK4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ckap4Q8BMK4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap4Q8BMK4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.13■□□□□ 0.33
Ckap4Q8BMK4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.13■□□□□ 0.33
Ckap4Q8BMK4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap4Q8BMK4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap4Q8BMK4 Gm38205-201ENSMUST00000192243 258 ntBASIC17.13■□□□□ 0.33
Ckap4Q8BMK4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap4Q8BMK4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap4Q8BMK4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap4Q8BMK4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap4Q8BMK4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ckap4Q8BMK4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap4Q8BMK4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.1■□□□□ 0.33
Ckap4Q8BMK4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap4Q8BMK4 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.1■□□□□ 0.33
Ckap4Q8BMK4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms