Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.41■□□□□ 0.06
Smg1Q8BKX6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg1Q8BKX6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg1Q8BKX6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg1Q8BKX6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg1Q8BKX6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg1Q8BKX6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.41■□□□□ 0.06
Smg1Q8BKX6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smg1Q8BKX6 Mzt1-203ENSMUST00000227948 952 ntBASIC15.41■□□□□ 0.06
Smg1Q8BKX6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg1Q8BKX6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smg1Q8BKX6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smg1Q8BKX6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.41■□□□□ 0.06
Smg1Q8BKX6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg1Q8BKX6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg1Q8BKX6 Gm34391-201ENSMUST00000203706 907 ntBASIC15.4■□□□□ 0.06
Smg1Q8BKX6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg1Q8BKX6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg1Q8BKX6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg1Q8BKX6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Smg1Q8BKX6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.4■□□□□ 0.06
Smg1Q8BKX6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.4■□□□□ 0.06
Smg1Q8BKX6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg1Q8BKX6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smg1Q8BKX6 Gm27525-201ENSMUST00000184465 107 ntBASIC15.4■□□□□ 0.06
Smg1Q8BKX6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smg1Q8BKX6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg1Q8BKX6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg1Q8BKX6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg1Q8BKX6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smg1Q8BKX6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Gm18115-201ENSMUST00000221209 621 ntBASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Gm10138-203ENSMUST00000206952 366 ntBASIC15.39■□□□□ 0.05
Smg1Q8BKX6 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.39■□□□□ 0.05
Smg1Q8BKX6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.38■□□□□ 0.05
Smg1Q8BKX6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smg1Q8BKX6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smg1Q8BKX6 Gm6623-201ENSMUST00000173570 544 ntBASIC15.38■□□□□ 0.05
Smg1Q8BKX6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smg1Q8BKX6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.38■□□□□ 0.05
Smg1Q8BKX6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smg1Q8BKX6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smg1Q8BKX6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Smg1Q8BKX6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smg1Q8BKX6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smg1Q8BKX6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Smg1Q8BKX6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smg1Q8BKX6 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.38■□□□□ 0.05
Smg1Q8BKX6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Smg1Q8BKX6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smg1Q8BKX6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smg1Q8BKX6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.38■□□□□ 0.05
Smg1Q8BKX6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smg1Q8BKX6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smg1Q8BKX6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.37■□□□□ 0.05
Smg1Q8BKX6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 Gm8587-201ENSMUST00000076538 843 ntBASIC15.37■□□□□ 0.05
Smg1Q8BKX6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smg1Q8BKX6 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.37■□□□□ 0.05
Smg1Q8BKX6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms