Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1bQ8BH88 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1bQ8BH88 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Depdc1bQ8BH88 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.71■□□□□ 0.75
Depdc1bQ8BH88 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.71■□□□□ 0.75
Depdc1bQ8BH88 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1bQ8BH88 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.71■□□□□ 0.75
Depdc1bQ8BH88 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1bQ8BH88 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.71■□□□□ 0.75
Depdc1bQ8BH88 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1bQ8BH88 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1bQ8BH88 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1bQ8BH88 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1bQ8BH88 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1bQ8BH88 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1bQ8BH88 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1bQ8BH88 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1bQ8BH88 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Depdc1bQ8BH88 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1bQ8BH88 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1bQ8BH88 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1bQ8BH88 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.7■□□□□ 0.74
Depdc1bQ8BH88 Gm5408-201ENSMUST00000197998 747 ntBASIC19.7■□□□□ 0.74
Depdc1bQ8BH88 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1bQ8BH88 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1bQ8BH88 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1bQ8BH88 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1bQ8BH88 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.69■□□□□ 0.74
Depdc1bQ8BH88 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Depdc1bQ8BH88 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.69■□□□□ 0.74
Depdc1bQ8BH88 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Depdc1bQ8BH88 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Depdc1bQ8BH88 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.69■□□□□ 0.74
Depdc1bQ8BH88 Gm6211-202ENSMUST00000167849 925 ntBASIC19.69■□□□□ 0.74
Depdc1bQ8BH88 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.69■□□□□ 0.74
Depdc1bQ8BH88 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Depdc1bQ8BH88 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.69■□□□□ 0.74
Depdc1bQ8BH88 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Depdc1bQ8BH88 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Depdc1bQ8BH88 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Depdc1bQ8BH88 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.69■□□□□ 0.74
Depdc1bQ8BH88 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Depdc1bQ8BH88 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Depdc1bQ8BH88 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Depdc1bQ8BH88 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Depdc1bQ8BH88 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.68■□□□□ 0.74
Depdc1bQ8BH88 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Depdc1bQ8BH88 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Depdc1bQ8BH88 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Depdc1bQ8BH88 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Depdc1bQ8BH88 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Depdc1bQ8BH88 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Depdc1bQ8BH88 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.67■□□□□ 0.74
Depdc1bQ8BH88 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Depdc1bQ8BH88 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Depdc1bQ8BH88 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Depdc1bQ8BH88 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Depdc1bQ8BH88 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Depdc1bQ8BH88 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Depdc1bQ8BH88 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Depdc1bQ8BH88 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Depdc1bQ8BH88 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Depdc1bQ8BH88 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Depdc1bQ8BH88 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Gm10653-202ENSMUST00000139570 835 ntBASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1bQ8BH88 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Depdc1bQ8BH88 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Depdc1bQ8BH88 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Depdc1bQ8BH88 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Depdc1bQ8BH88 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.65■□□□□ 0.74
Depdc1bQ8BH88 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Depdc1bQ8BH88 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms