Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.07■□□□□ 0.32
Atg4bQ8BGE6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4bQ8BGE6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4bQ8BGE6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.07■□□□□ 0.32
Atg4bQ8BGE6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4bQ8BGE6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Atg4bQ8BGE6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4bQ8BGE6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.07■□□□□ 0.32
Atg4bQ8BGE6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4bQ8BGE6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atg4bQ8BGE6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Atg4bQ8BGE6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atg4bQ8BGE6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atg4bQ8BGE6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atg4bQ8BGE6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atg4bQ8BGE6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atg4bQ8BGE6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atg4bQ8BGE6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atg4bQ8BGE6 Gm44549-201ENSMUST00000208351 577 ntBASIC17.06■□□□□ 0.32
Atg4bQ8BGE6 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.06■□□□□ 0.32
Atg4bQ8BGE6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atg4bQ8BGE6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atg4bQ8BGE6 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.06■□□□□ 0.32
Atg4bQ8BGE6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Atg4bQ8BGE6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Atg4bQ8BGE6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atg4bQ8BGE6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atg4bQ8BGE6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atg4bQ8BGE6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atg4bQ8BGE6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atg4bQ8BGE6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Atg4bQ8BGE6 Tgds-204ENSMUST00000228543 1594 ntBASIC17.04■□□□□ 0.32
Atg4bQ8BGE6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.04■□□□□ 0.32
Atg4bQ8BGE6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.04■□□□□ 0.32
Atg4bQ8BGE6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atg4bQ8BGE6 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.04■□□□□ 0.32
Atg4bQ8BGE6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Atg4bQ8BGE6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atg4bQ8BGE6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atg4bQ8BGE6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atg4bQ8BGE6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atg4bQ8BGE6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Atg4bQ8BGE6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atg4bQ8BGE6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atg4bQ8BGE6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Atg4bQ8BGE6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms