Protein–RNA interactions for Protein: Q8BFS6

Cpped1, Serine/threonine-protein phosphatase CPPED1, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpped1Q8BFS6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpped1Q8BFS6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpped1Q8BFS6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.71■□□□□ 0.43
Cpped1Q8BFS6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Cpped1Q8BFS6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cpped1Q8BFS6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cpped1Q8BFS6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cpped1Q8BFS6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpped1Q8BFS6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpped1Q8BFS6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.69■□□□□ 0.42
Cpped1Q8BFS6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cpped1Q8BFS6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cpped1Q8BFS6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
Cpped1Q8BFS6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpped1Q8BFS6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpped1Q8BFS6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpped1Q8BFS6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cpped1Q8BFS6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpped1Q8BFS6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpped1Q8BFS6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.69■□□□□ 0.42
Cpped1Q8BFS6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpped1Q8BFS6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpped1Q8BFS6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpped1Q8BFS6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cpped1Q8BFS6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cpped1Q8BFS6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpped1Q8BFS6 Gm26524-201ENSMUST00000192339 390 ntBASIC17.68■□□□□ 0.42
Cpped1Q8BFS6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cpped1Q8BFS6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpped1Q8BFS6 Gm4968-201ENSMUST00000071458 858 ntBASIC17.68■□□□□ 0.42
Cpped1Q8BFS6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cpped1Q8BFS6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cpped1Q8BFS6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Cpped1Q8BFS6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.68■□□□□ 0.42
Cpped1Q8BFS6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cpped1Q8BFS6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpped1Q8BFS6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpped1Q8BFS6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpped1Q8BFS6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpped1Q8BFS6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cpped1Q8BFS6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Cpped1Q8BFS6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms