Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim50Q810I2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim50Q810I2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim50Q810I2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim50Q810I2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Trim50Q810I2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim50Q810I2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim50Q810I2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim50Q810I2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim50Q810I2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim50Q810I2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim50Q810I2 Gm22325-201ENSMUST00000158904 308 ntBASIC17.67■□□□□ 0.42
Trim50Q810I2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim50Q810I2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim50Q810I2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim50Q810I2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim50Q810I2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim50Q810I2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim50Q810I2 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.66■□□□□ 0.42
Trim50Q810I2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim50Q810I2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trim50Q810I2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim50Q810I2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim50Q810I2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim50Q810I2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim50Q810I2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim50Q810I2 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.65■□□□□ 0.42
Trim50Q810I2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim50Q810I2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim50Q810I2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim50Q810I2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim50Q810I2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim50Q810I2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trim50Q810I2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim50Q810I2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Trim50Q810I2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim50Q810I2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim50Q810I2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trim50Q810I2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim50Q810I2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim50Q810I2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim50Q810I2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
Trim50Q810I2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim50Q810I2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim50Q810I2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim50Q810I2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim50Q810I2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim50Q810I2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim50Q810I2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim50Q810I2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim50Q810I2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim50Q810I2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim50Q810I2 Gm26524-201ENSMUST00000192339 390 ntBASIC17.64■□□□□ 0.41
Trim50Q810I2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Trim50Q810I2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim50Q810I2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim50Q810I2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trim50Q810I2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim50Q810I2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim50Q810I2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim50Q810I2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim50Q810I2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim50Q810I2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.63■□□□□ 0.41
Trim50Q810I2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Trim50Q810I2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim50Q810I2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trim50Q810I2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim50Q810I2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim50Q810I2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim50Q810I2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim50Q810I2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trim50Q810I2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim50Q810I2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim50Q810I2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trim50Q810I2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim50Q810I2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trim50Q810I2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim50Q810I2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim50Q810I2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim50Q810I2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim50Q810I2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim50Q810I2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim50Q810I2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim50Q810I2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim50Q810I2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim50Q810I2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim50Q810I2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.62■□□□□ 0.41
Trim50Q810I2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.62■□□□□ 0.41
Trim50Q810I2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trim50Q810I2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trim50Q810I2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim50Q810I2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim50Q810I2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim50Q810I2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim50Q810I2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim50Q810I2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim50Q810I2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim50Q810I2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim50Q810I2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim50Q810I2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms