Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Srrm3Q80WV7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Srrm3Q80WV7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Srrm3Q80WV7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Srrm3Q80WV7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Srrm3Q80WV7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Srrm3Q80WV7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Srrm3Q80WV7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Srrm3Q80WV7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Srrm3Q80WV7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.87■□□□□ 0.61
Srrm3Q80WV7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Srrm3Q80WV7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.87■□□□□ 0.61
Srrm3Q80WV7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Srrm3Q80WV7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Srrm3Q80WV7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Srrm3Q80WV7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Srrm3Q80WV7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Srrm3Q80WV7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srrm3Q80WV7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srrm3Q80WV7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srrm3Q80WV7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Srrm3Q80WV7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srrm3Q80WV7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srrm3Q80WV7 Gm10252-201ENSMUST00000209541 832 ntBASIC18.86■□□□□ 0.61
Srrm3Q80WV7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.86■□□□□ 0.61
Srrm3Q80WV7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Srrm3Q80WV7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srrm3Q80WV7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srrm3Q80WV7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Srrm3Q80WV7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Srrm3Q80WV7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Srrm3Q80WV7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Srrm3Q80WV7 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.85■□□□□ 0.61
Srrm3Q80WV7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Srrm3Q80WV7 Gm12933-201ENSMUST00000120203 872 ntBASIC18.85■□□□□ 0.61
Srrm3Q80WV7 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.85■□□□□ 0.61
Srrm3Q80WV7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Srrm3Q80WV7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Srrm3Q80WV7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Srrm3Q80WV7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Srrm3Q80WV7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Srrm3Q80WV7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Srrm3Q80WV7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Srrm3Q80WV7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Srrm3Q80WV7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Srrm3Q80WV7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Srrm3Q80WV7 Gm40848-201ENSMUST00000221998 324 ntBASIC18.84■□□□□ 0.61
Srrm3Q80WV7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Srrm3Q80WV7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.84■□□□□ 0.61
Srrm3Q80WV7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Srrm3Q80WV7 Mir7071-201ENSMUST00000184847 69 ntBASIC18.83■□□□□ 0.6
Srrm3Q80WV7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm3Q80WV7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.83■□□□□ 0.6
Srrm3Q80WV7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm3Q80WV7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm3Q80WV7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm3Q80WV7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm3Q80WV7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm3Q80WV7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Srrm3Q80WV7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Srrm3Q80WV7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm3Q80WV7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm3Q80WV7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm3Q80WV7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm3Q80WV7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Srrm3Q80WV7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Srrm3Q80WV7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm3Q80WV7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm3Q80WV7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm3Q80WV7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.82■□□□□ 0.6
Srrm3Q80WV7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm3Q80WV7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm3Q80WV7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm3Q80WV7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.82■□□□□ 0.6
Srrm3Q80WV7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
Srrm3Q80WV7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.82■□□□□ 0.6
Srrm3Q80WV7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
Srrm3Q80WV7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Srrm3Q80WV7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm3Q80WV7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm3Q80WV7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm3Q80WV7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Srrm3Q80WV7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.81■□□□□ 0.6
Srrm3Q80WV7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.81■□□□□ 0.6
Srrm3Q80WV7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm3Q80WV7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm3Q80WV7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm3Q80WV7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Srrm3Q80WV7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm3Q80WV7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.81■□□□□ 0.6
Srrm3Q80WV7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm3Q80WV7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm3Q80WV7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm3Q80WV7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.81■□□□□ 0.6
Srrm3Q80WV7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm3Q80WV7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm3Q80WV7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm3Q80WV7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm3Q80WV7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Srrm3Q80WV7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms