Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.19■□□□□ 0.5
Tnrc18Q80WC3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Tnrc18Q80WC3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc18Q80WC3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.19■□□□□ 0.5
Tnrc18Q80WC3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc18Q80WC3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc18Q80WC3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc18Q80WC3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc18Q80WC3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc18Q80WC3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.19■□□□□ 0.5
Tnrc18Q80WC3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc18Q80WC3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnrc18Q80WC3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc18Q80WC3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc18Q80WC3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc18Q80WC3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc18Q80WC3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc18Q80WC3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc18Q80WC3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc18Q80WC3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc18Q80WC3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc18Q80WC3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc18Q80WC3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc18Q80WC3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnrc18Q80WC3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc18Q80WC3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tnrc18Q80WC3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc18Q80WC3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc18Q80WC3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc18Q80WC3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc18Q80WC3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc18Q80WC3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc18Q80WC3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Tnrc18Q80WC3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc18Q80WC3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc18Q80WC3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.17■□□□□ 0.5
Tnrc18Q80WC3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.17■□□□□ 0.5
Tnrc18Q80WC3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tnrc18Q80WC3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnrc18Q80WC3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Gm29518-201ENSMUST00000190858 372 ntBASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnrc18Q80WC3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnrc18Q80WC3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tnrc18Q80WC3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnrc18Q80WC3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tnrc18Q80WC3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Tnrc18Q80WC3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tnrc18Q80WC3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnrc18Q80WC3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.15■□□□□ 0.5
Tnrc18Q80WC3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnrc18Q80WC3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnrc18Q80WC3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Tnrc18Q80WC3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tnrc18Q80WC3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.14■□□□□ 0.49
Tnrc18Q80WC3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tnrc18Q80WC3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.14■□□□□ 0.49
Tnrc18Q80WC3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.14■□□□□ 0.49
Tnrc18Q80WC3 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.14■□□□□ 0.49
Tnrc18Q80WC3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnrc18Q80WC3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnrc18Q80WC3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnrc18Q80WC3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Tnrc18Q80WC3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.14■□□□□ 0.49
Tnrc18Q80WC3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnrc18Q80WC3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tnrc18Q80WC3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnrc18Q80WC3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Tnrc18Q80WC3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnrc18Q80WC3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnrc18Q80WC3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnrc18Q80WC3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tnrc18Q80WC3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnrc18Q80WC3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnrc18Q80WC3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Tnrc18Q80WC3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms