Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Otop1Q80VM9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otop1Q80VM9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Otop1Q80VM9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.37■□□□□ 0.37
Otop1Q80VM9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otop1Q80VM9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Otop1Q80VM9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otop1Q80VM9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otop1Q80VM9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otop1Q80VM9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otop1Q80VM9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Otop1Q80VM9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otop1Q80VM9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otop1Q80VM9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otop1Q80VM9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.36■□□□□ 0.37
Otop1Q80VM9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.36■□□□□ 0.37
Otop1Q80VM9 Gm11539-201ENSMUST00000119837 557 ntBASIC17.36■□□□□ 0.37
Otop1Q80VM9 Gm13436-201ENSMUST00000120418 567 ntBASIC17.36■□□□□ 0.37
Otop1Q80VM9 Gm6659-201ENSMUST00000174752 547 ntBASIC17.36■□□□□ 0.37
Otop1Q80VM9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otop1Q80VM9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.36■□□□□ 0.37
Otop1Q80VM9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.36■□□□□ 0.37
Otop1Q80VM9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otop1Q80VM9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otop1Q80VM9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otop1Q80VM9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Otop1Q80VM9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Otop1Q80VM9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otop1Q80VM9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otop1Q80VM9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otop1Q80VM9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otop1Q80VM9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otop1Q80VM9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Otop1Q80VM9 Gm10138-203ENSMUST00000206952 366 ntBASIC17.35■□□□□ 0.37
Otop1Q80VM9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otop1Q80VM9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otop1Q80VM9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Otop1Q80VM9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Otop1Q80VM9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otop1Q80VM9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otop1Q80VM9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otop1Q80VM9 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.34■□□□□ 0.37
Otop1Q80VM9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otop1Q80VM9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otop1Q80VM9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.34■□□□□ 0.37
Otop1Q80VM9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otop1Q80VM9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Otop1Q80VM9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Otop1Q80VM9 Zfp783-201ENSMUST00000095946 670 ntBASIC17.34■□□□□ 0.37
Otop1Q80VM9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otop1Q80VM9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otop1Q80VM9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otop1Q80VM9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Otop1Q80VM9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Otop1Q80VM9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Otop1Q80VM9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Otop1Q80VM9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Otop1Q80VM9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Otop1Q80VM9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Otop1Q80VM9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Otop1Q80VM9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Otop1Q80VM9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Otop1Q80VM9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Otop1Q80VM9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.33■□□□□ 0.36
Otop1Q80VM9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Otop1Q80VM9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Otop1Q80VM9 Gm7889-201ENSMUST00000185591 958 ntBASIC17.33■□□□□ 0.36
Otop1Q80VM9 Gm18025-201ENSMUST00000221733 862 ntBASIC17.33■□□□□ 0.36
Otop1Q80VM9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Otop1Q80VM9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Otop1Q80VM9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Otop1Q80VM9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Otop1Q80VM9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Otop1Q80VM9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.32■□□□□ 0.36
Otop1Q80VM9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Otop1Q80VM9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Otop1Q80VM9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Otop1Q80VM9 Gm42545-201ENSMUST00000202755 922 ntBASIC17.32■□□□□ 0.36
Otop1Q80VM9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Otop1Q80VM9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Otop1Q80VM9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Otop1Q80VM9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Otop1Q80VM9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Otop1Q80VM9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.32■□□□□ 0.36
Otop1Q80VM9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Otop1Q80VM9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Otop1Q80VM9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Otop1Q80VM9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Otop1Q80VM9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Otop1Q80VM9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Otop1Q80VM9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Otop1Q80VM9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.31■□□□□ 0.36
Otop1Q80VM9 Odf3b-204ENSMUST00000227834 930 ntBASIC17.31■□□□□ 0.36
Otop1Q80VM9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.31■□□□□ 0.36
Otop1Q80VM9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Otop1Q80VM9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Otop1Q80VM9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Otop1Q80VM9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Otop1Q80VM9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Otop1Q80VM9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms