Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim62Q80V85 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.79■□□□□ 0.6
Trim62Q80V85 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim62Q80V85 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim62Q80V85 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim62Q80V85 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim62Q80V85 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim62Q80V85 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim62Q80V85 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim62Q80V85 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim62Q80V85 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim62Q80V85 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim62Q80V85 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim62Q80V85 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Trim62Q80V85 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim62Q80V85 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim62Q80V85 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim62Q80V85 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.78■□□□□ 0.6
Trim62Q80V85 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim62Q80V85 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim62Q80V85 Gm11927-201ENSMUST00000118472 759 ntBASIC18.78■□□□□ 0.6
Trim62Q80V85 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.78■□□□□ 0.6
Trim62Q80V85 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim62Q80V85 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim62Q80V85 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim62Q80V85 Trmt13-210ENSMUST00000198454 880 ntBASIC18.78■□□□□ 0.6
Trim62Q80V85 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.78■□□□□ 0.6
Trim62Q80V85 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim62Q80V85 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim62Q80V85 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim62Q80V85 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim62Q80V85 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.77■□□□□ 0.6
Trim62Q80V85 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.77■□□□□ 0.6
Trim62Q80V85 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.77■□□□□ 0.6
Trim62Q80V85 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim62Q80V85 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim62Q80V85 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim62Q80V85 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim62Q80V85 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Trim62Q80V85 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim62Q80V85 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim62Q80V85 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim62Q80V85 Iqck-206ENSMUST00000208658 2891 ntBASIC18.76■□□□□ 0.59
Trim62Q80V85 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim62Q80V85 Gm37856-201ENSMUST00000191634 999 ntBASIC18.76■□□□□ 0.59
Trim62Q80V85 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.76■□□□□ 0.59
Trim62Q80V85 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim62Q80V85 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim62Q80V85 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Trim62Q80V85 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.76■□□□□ 0.59
Trim62Q80V85 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Trim62Q80V85 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim62Q80V85 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim62Q80V85 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim62Q80V85 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim62Q80V85 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Trim62Q80V85 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim62Q80V85 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim62Q80V85 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim62Q80V85 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim62Q80V85 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim62Q80V85 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.75■□□□□ 0.59
Trim62Q80V85 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim62Q80V85 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim62Q80V85 Gm18666-201ENSMUST00000190039 958 ntBASIC18.75■□□□□ 0.59
Trim62Q80V85 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.75■□□□□ 0.59
Trim62Q80V85 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim62Q80V85 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim62Q80V85 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim62Q80V85 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim62Q80V85 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim62Q80V85 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim62Q80V85 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim62Q80V85 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim62Q80V85 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim62Q80V85 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim62Q80V85 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.74■□□□□ 0.59
Trim62Q80V85 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trim62Q80V85 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim62Q80V85 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim62Q80V85 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim62Q80V85 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim62Q80V85 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim62Q80V85 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim62Q80V85 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim62Q80V85 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trim62Q80V85 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim62Q80V85 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim62Q80V85 Tgds-204ENSMUST00000228543 1594 ntBASIC18.73■□□□□ 0.59
Trim62Q80V85 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim62Q80V85 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim62Q80V85 Gm11249-201ENSMUST00000117071 859 ntBASIC18.73■□□□□ 0.59
Trim62Q80V85 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim62Q80V85 Gm27275-201ENSMUST00000184318 272 ntBASIC18.73■□□□□ 0.59
Trim62Q80V85 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.73■□□□□ 0.59
Trim62Q80V85 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.73■□□□□ 0.59
Trim62Q80V85 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim62Q80V85 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim62Q80V85 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trim62Q80V85 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms