Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Rpap1Q80TE0 Gm18101-201ENSMUST00000215769 548 ntBASIC28.27■■■□□ 2.12
Rpap1Q80TE0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC28.27■■■□□ 2.12
Rpap1Q80TE0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rpap1Q80TE0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rpap1Q80TE0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rpap1Q80TE0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.12
Rpap1Q80TE0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Rpap1Q80TE0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC28.26■■■□□ 2.12
Rpap1Q80TE0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Rpap1Q80TE0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Rpap1Q80TE0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.12
Rpap1Q80TE0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC28.26■■■□□ 2.12
Rpap1Q80TE0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Rpap1Q80TE0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Rpap1Q80TE0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC28.26■■■□□ 2.12
Rpap1Q80TE0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Rpap1Q80TE0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rpap1Q80TE0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Rpap1Q80TE0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Rpap1Q80TE0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rpap1Q80TE0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC28.26■■■□□ 2.11
Rpap1Q80TE0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
Rpap1Q80TE0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rpap1Q80TE0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rpap1Q80TE0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rpap1Q80TE0 Gm7856-201ENSMUST00000117514 1493 ntBASIC28.25■■■□□ 2.11
Rpap1Q80TE0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rpap1Q80TE0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rpap1Q80TE0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rpap1Q80TE0 Gm4217-201ENSMUST00000182243 1002 ntBASIC28.25■■■□□ 2.11
Rpap1Q80TE0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC28.25■■■□□ 2.11
Rpap1Q80TE0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Rpap1Q80TE0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rpap1Q80TE0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rpap1Q80TE0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC28.24■■■□□ 2.11
Rpap1Q80TE0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rpap1Q80TE0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC28.24■■■□□ 2.11
Rpap1Q80TE0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC28.24■■■□□ 2.11
Rpap1Q80TE0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Rpap1Q80TE0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rpap1Q80TE0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rpap1Q80TE0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rpap1Q80TE0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Rpap1Q80TE0 Gm2274-201ENSMUST00000184539 609 ntBASIC28.23■■■□□ 2.11
Rpap1Q80TE0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Rpap1Q80TE0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rpap1Q80TE0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rpap1Q80TE0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rpap1Q80TE0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rpap1Q80TE0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rpap1Q80TE0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rpap1Q80TE0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
Rpap1Q80TE0 Gm14859-201ENSMUST00000117752 357 ntBASIC28.22■■■□□ 2.11
Rpap1Q80TE0 Gm22697-201ENSMUST00000175194 63 ntBASIC28.22■■■□□ 2.11
Rpap1Q80TE0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rpap1Q80TE0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Rpap1Q80TE0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
Rpap1Q80TE0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rpap1Q80TE0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
Rpap1Q80TE0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rpap1Q80TE0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rpap1Q80TE0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Rpap1Q80TE0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rpap1Q80TE0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rpap1Q80TE0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rpap1Q80TE0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC28.2■■■□□ 2.11
Rpap1Q80TE0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Rpap1Q80TE0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.11
Rpap1Q80TE0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
Rpap1Q80TE0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Rpap1Q80TE0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Rpap1Q80TE0 Gm7284-201ENSMUST00000131667 944 ntBASIC28.19■■■□□ 2.1
Rpap1Q80TE0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC28.19■■■□□ 2.1
Rpap1Q80TE0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Rpap1Q80TE0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rpap1Q80TE0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rpap1Q80TE0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Rpap1Q80TE0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
Rpap1Q80TE0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC28.18■■■□□ 2.1
Rpap1Q80TE0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rpap1Q80TE0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rpap1Q80TE0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Rpap1Q80TE0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Rpap1Q80TE0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
Rpap1Q80TE0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC28.18■■■□□ 2.1
Rpap1Q80TE0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC28.18■■■□□ 2.1
Rpap1Q80TE0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Rpap1Q80TE0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Rpap1Q80TE0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Rpap1Q80TE0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC28.17■■■□□ 2.1
Rpap1Q80TE0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Rpap1Q80TE0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Rpap1Q80TE0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC28.17■■■□□ 2.1
Rpap1Q80TE0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC28.17■■■□□ 2.1
Rpap1Q80TE0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Rpap1Q80TE0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rpap1Q80TE0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rpap1Q80TE0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Rpap1Q80TE0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms