Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Tgds-204ENSMUST00000228543 1594 ntBASIC17.41■□□□□ 0.38
Rfx4Q7TNK1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx4Q7TNK1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rfx4Q7TNK1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rfx4Q7TNK1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx4Q7TNK1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx4Q7TNK1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx4Q7TNK1 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.41■□□□□ 0.38
Rfx4Q7TNK1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx4Q7TNK1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx4Q7TNK1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx4Q7TNK1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx4Q7TNK1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx4Q7TNK1 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.41■□□□□ 0.38
Rfx4Q7TNK1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Gm27801-201ENSMUST00000184174 223 ntBASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx4Q7TNK1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rfx4Q7TNK1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rfx4Q7TNK1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rfx4Q7TNK1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rfx4Q7TNK1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.39■□□□□ 0.37
Rfx4Q7TNK1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx4Q7TNK1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx4Q7TNK1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx4Q7TNK1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx4Q7TNK1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx4Q7TNK1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.39■□□□□ 0.37
Rfx4Q7TNK1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx4Q7TNK1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx4Q7TNK1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx4Q7TNK1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx4Q7TNK1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx4Q7TNK1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx4Q7TNK1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx4Q7TNK1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx4Q7TNK1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx4Q7TNK1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx4Q7TNK1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx4Q7TNK1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx4Q7TNK1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx4Q7TNK1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx4Q7TNK1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rfx4Q7TNK1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx4Q7TNK1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx4Q7TNK1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.38■□□□□ 0.37
Rfx4Q7TNK1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx4Q7TNK1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.38■□□□□ 0.37
Rfx4Q7TNK1 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.38■□□□□ 0.37
Rfx4Q7TNK1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx4Q7TNK1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rfx4Q7TNK1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx4Q7TNK1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx4Q7TNK1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx4Q7TNK1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx4Q7TNK1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx4Q7TNK1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx4Q7TNK1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx4Q7TNK1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx4Q7TNK1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx4Q7TNK1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx4Q7TNK1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx4Q7TNK1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx4Q7TNK1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx4Q7TNK1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx4Q7TNK1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx4Q7TNK1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx4Q7TNK1 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.36■□□□□ 0.37
Rfx4Q7TNK1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Rfx4Q7TNK1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx4Q7TNK1 Gm11421-201ENSMUST00000122124 294 ntBASIC17.36■□□□□ 0.37
Rfx4Q7TNK1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.36■□□□□ 0.37
Rfx4Q7TNK1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx4Q7TNK1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.36■□□□□ 0.37
Rfx4Q7TNK1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx4Q7TNK1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx4Q7TNK1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx4Q7TNK1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx4Q7TNK1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx4Q7TNK1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms