Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rnf139Q7TMV1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rnf139Q7TMV1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf139Q7TMV1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rnf139Q7TMV1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf139Q7TMV1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf139Q7TMV1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf139Q7TMV1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.39■□□□□ 0.69
Rnf139Q7TMV1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf139Q7TMV1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf139Q7TMV1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf139Q7TMV1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Rnf139Q7TMV1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf139Q7TMV1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf139Q7TMV1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Gm12896-201ENSMUST00000118430 226 ntBASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Gm20049-201ENSMUST00000219950 730 ntBASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Fst-202ENSMUST00000223640 2612 ntBASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Flg-201ENSMUST00000050758 1488 ntBASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf139Q7TMV1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rnf139Q7TMV1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf139Q7TMV1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf139Q7TMV1 Dio3-201ENSMUST00000097228 1449 ntBASIC19.37■□□□□ 0.69
Rnf139Q7TMV1 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.37■□□□□ 0.69
Rnf139Q7TMV1 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.37■□□□□ 0.69
Rnf139Q7TMV1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf139Q7TMV1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rnf139Q7TMV1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf139Q7TMV1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf139Q7TMV1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rnf139Q7TMV1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf139Q7TMV1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf139Q7TMV1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf139Q7TMV1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf139Q7TMV1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.36■□□□□ 0.69
Rnf139Q7TMV1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf139Q7TMV1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf139Q7TMV1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.36■□□□□ 0.69
Rnf139Q7TMV1 Gm38285-201ENSMUST00000192928 922 ntBASIC19.36■□□□□ 0.69
Rnf139Q7TMV1 Zfp783-201ENSMUST00000095946 670 ntBASIC19.36■□□□□ 0.69
Rnf139Q7TMV1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf139Q7TMV1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf139Q7TMV1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf139Q7TMV1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf139Q7TMV1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rnf139Q7TMV1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf139Q7TMV1 Gm11927-201ENSMUST00000118472 759 ntBASIC19.35■□□□□ 0.69
Rnf139Q7TMV1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.35■□□□□ 0.69
Rnf139Q7TMV1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.35■□□□□ 0.69
Rnf139Q7TMV1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.35■□□□□ 0.69
Rnf139Q7TMV1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.35■□□□□ 0.69
Rnf139Q7TMV1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Rnf139Q7TMV1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf139Q7TMV1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rnf139Q7TMV1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.35■□□□□ 0.69
Rnf139Q7TMV1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rnf139Q7TMV1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Gm12527-201ENSMUST00000117967 564 ntBASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf139Q7TMV1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.69
Rnf139Q7TMV1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf139Q7TMV1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf139Q7TMV1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf139Q7TMV1 Gm27275-201ENSMUST00000184318 272 ntBASIC19.33■□□□□ 0.68
Rnf139Q7TMV1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf139Q7TMV1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf139Q7TMV1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms