Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scn4bQ7M729 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn4bQ7M729 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.65■□□□□ 0.42
Scn4bQ7M729 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn4bQ7M729 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn4bQ7M729 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn4bQ7M729 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn4bQ7M729 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scn4bQ7M729 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Scn4bQ7M729 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.64■□□□□ 0.42
Scn4bQ7M729 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Scn4bQ7M729 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Scn4bQ7M729 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn4bQ7M729 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Rarb-207ENSMUST00000225921 2756 ntBASIC17.64■□□□□ 0.41
Scn4bQ7M729 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Scn4bQ7M729 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn4bQ7M729 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn4bQ7M729 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.63■□□□□ 0.41
Scn4bQ7M729 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.63■□□□□ 0.41
Scn4bQ7M729 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn4bQ7M729 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn4bQ7M729 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn4bQ7M729 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Scn4bQ7M729 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn4bQ7M729 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.63■□□□□ 0.41
Scn4bQ7M729 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.63■□□□□ 0.41
Scn4bQ7M729 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.63■□□□□ 0.41
Scn4bQ7M729 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn4bQ7M729 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn4bQ7M729 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn4bQ7M729 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Scn4bQ7M729 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn4bQ7M729 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn4bQ7M729 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn4bQ7M729 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.62■□□□□ 0.41
Scn4bQ7M729 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.62■□□□□ 0.41
Scn4bQ7M729 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn4bQ7M729 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Scn4bQ7M729 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Scn4bQ7M729 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Scn4bQ7M729 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn4bQ7M729 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn4bQ7M729 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.62■□□□□ 0.41
Scn4bQ7M729 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Scn4bQ7M729 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn4bQ7M729 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Gm7290-201ENSMUST00000104990 617 ntBASIC17.61■□□□□ 0.41
Scn4bQ7M729 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Gm12918-201ENSMUST00000120234 636 ntBASIC17.61■□□□□ 0.41
Scn4bQ7M729 Gm15710-201ENSMUST00000121821 636 ntBASIC17.61■□□□□ 0.41
Scn4bQ7M729 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Gm5075-201ENSMUST00000196916 622 ntBASIC17.61■□□□□ 0.41
Scn4bQ7M729 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.61■□□□□ 0.41
Scn4bQ7M729 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.61■□□□□ 0.41
Scn4bQ7M729 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.61■□□□□ 0.41
Scn4bQ7M729 Tgds-204ENSMUST00000228543 1594 ntBASIC17.61■□□□□ 0.41
Scn4bQ7M729 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn4bQ7M729 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn4bQ7M729 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn4bQ7M729 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Scn4bQ7M729 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms