Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Lsm8Q6ZWM4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Lsm8Q6ZWM4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm8Q6ZWM4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm8Q6ZWM4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.02■□□□□ 0.64
Lsm8Q6ZWM4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm8Q6ZWM4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm8Q6ZWM4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm8Q6ZWM4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lsm8Q6ZWM4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lsm8Q6ZWM4 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.02■□□□□ 0.63
Lsm8Q6ZWM4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lsm8Q6ZWM4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.01■□□□□ 0.63
Lsm8Q6ZWM4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm8Q6ZWM4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm8Q6ZWM4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Lsm8Q6ZWM4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm8Q6ZWM4 Fst-202ENSMUST00000223640 2612 ntBASIC19.01■□□□□ 0.63
Lsm8Q6ZWM4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Lsm8Q6ZWM4 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.01■□□□□ 0.63
Lsm8Q6ZWM4 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.01■□□□□ 0.63
Lsm8Q6ZWM4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.01■□□□□ 0.63
Lsm8Q6ZWM4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm8Q6ZWM4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.01■□□□□ 0.63
Lsm8Q6ZWM4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm8Q6ZWM4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm8Q6ZWM4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm8Q6ZWM4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Lsm8Q6ZWM4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19■□□□□ 0.63
Lsm8Q6ZWM4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Lsm8Q6ZWM4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm8Q6ZWM4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lsm8Q6ZWM4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19■□□□□ 0.63
Lsm8Q6ZWM4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm8Q6ZWM4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm8Q6ZWM4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm8Q6ZWM4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm8Q6ZWM4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm8Q6ZWM4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm8Q6ZWM4 Gm43182-201ENSMUST00000199476 2528 ntBASIC19■□□□□ 0.63
Lsm8Q6ZWM4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lsm8Q6ZWM4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm8Q6ZWM4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm8Q6ZWM4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19■□□□□ 0.63
Lsm8Q6ZWM4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 Gm5408-201ENSMUST00000197998 747 ntBASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 Gm10602-201ENSMUST00000098239 609 ntBASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Lsm8Q6ZWM4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm8Q6ZWM4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm8Q6ZWM4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.97■□□□□ 0.63
Lsm8Q6ZWM4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm8Q6ZWM4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm8Q6ZWM4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Lsm8Q6ZWM4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm8Q6ZWM4 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.97■□□□□ 0.63
Lsm8Q6ZWM4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm8Q6ZWM4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.97■□□□□ 0.63
Lsm8Q6ZWM4 Gm38285-201ENSMUST00000192928 922 ntBASIC18.97■□□□□ 0.63
Lsm8Q6ZWM4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm8Q6ZWM4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm8Q6ZWM4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm8Q6ZWM4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm8Q6ZWM4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
Lsm8Q6ZWM4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms