Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RfflQ6ZQM0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RfflQ6ZQM0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RfflQ6ZQM0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RfflQ6ZQM0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RfflQ6ZQM0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RfflQ6ZQM0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.58■□□□□ 0.41
RfflQ6ZQM0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.58■□□□□ 0.41
RfflQ6ZQM0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.58■□□□□ 0.41
RfflQ6ZQM0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RfflQ6ZQM0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RfflQ6ZQM0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RfflQ6ZQM0 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.58■□□□□ 0.4
RfflQ6ZQM0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RfflQ6ZQM0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RfflQ6ZQM0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RfflQ6ZQM0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RfflQ6ZQM0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.57■□□□□ 0.4
RfflQ6ZQM0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RfflQ6ZQM0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RfflQ6ZQM0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.57■□□□□ 0.4
RfflQ6ZQM0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
RfflQ6ZQM0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RfflQ6ZQM0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.57■□□□□ 0.4
RfflQ6ZQM0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RfflQ6ZQM0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RfflQ6ZQM0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RfflQ6ZQM0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RfflQ6ZQM0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RfflQ6ZQM0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RfflQ6ZQM0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.56■□□□□ 0.4
RfflQ6ZQM0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RfflQ6ZQM0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RfflQ6ZQM0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RfflQ6ZQM0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RfflQ6ZQM0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RfflQ6ZQM0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RfflQ6ZQM0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RfflQ6ZQM0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RfflQ6ZQM0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RfflQ6ZQM0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
RfflQ6ZQM0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RfflQ6ZQM0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RfflQ6ZQM0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RfflQ6ZQM0 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.55■□□□□ 0.4
RfflQ6ZQM0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RfflQ6ZQM0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RfflQ6ZQM0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RfflQ6ZQM0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
RfflQ6ZQM0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RfflQ6ZQM0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RfflQ6ZQM0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RfflQ6ZQM0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RfflQ6ZQM0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RfflQ6ZQM0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RfflQ6ZQM0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
RfflQ6ZQM0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RfflQ6ZQM0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RfflQ6ZQM0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RfflQ6ZQM0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RfflQ6ZQM0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RfflQ6ZQM0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RfflQ6ZQM0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RfflQ6ZQM0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RfflQ6ZQM0 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.53■□□□□ 0.4
RfflQ6ZQM0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.53■□□□□ 0.4
RfflQ6ZQM0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RfflQ6ZQM0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RfflQ6ZQM0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RfflQ6ZQM0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RfflQ6ZQM0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.52■□□□□ 0.4
RfflQ6ZQM0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RfflQ6ZQM0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.52■□□□□ 0.4
RfflQ6ZQM0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RfflQ6ZQM0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RfflQ6ZQM0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RfflQ6ZQM0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.52■□□□□ 0.39
RfflQ6ZQM0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RfflQ6ZQM0 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.51■□□□□ 0.39
RfflQ6ZQM0 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.51■□□□□ 0.39
RfflQ6ZQM0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RfflQ6ZQM0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RfflQ6ZQM0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms