Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm1aQ6ZQ88 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Kdm1aQ6ZQ88 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm1aQ6ZQ88 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm1aQ6ZQ88 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm1aQ6ZQ88 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm1aQ6ZQ88 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.06■□□□□ 0.8
Kdm1aQ6ZQ88 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Kdm1aQ6ZQ88 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Kdm1aQ6ZQ88 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm1aQ6ZQ88 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm1aQ6ZQ88 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm1aQ6ZQ88 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm1aQ6ZQ88 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm1aQ6ZQ88 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm1aQ6ZQ88 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm1aQ6ZQ88 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1aQ6ZQ88 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm1aQ6ZQ88 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm1aQ6ZQ88 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.04■□□□□ 0.8
Kdm1aQ6ZQ88 Gm18284-201ENSMUST00000172604 624 ntBASIC20.04■□□□□ 0.8
Kdm1aQ6ZQ88 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.04■□□□□ 0.8
Kdm1aQ6ZQ88 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm1aQ6ZQ88 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm1aQ6ZQ88 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Kdm1aQ6ZQ88 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm1aQ6ZQ88 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm1aQ6ZQ88 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Kdm1aQ6ZQ88 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm1aQ6ZQ88 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.03■□□□□ 0.8
Kdm1aQ6ZQ88 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.03■□□□□ 0.8
Kdm1aQ6ZQ88 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm1aQ6ZQ88 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm1aQ6ZQ88 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm1aQ6ZQ88 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Kdm1aQ6ZQ88 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kdm1aQ6ZQ88 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kdm1aQ6ZQ88 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
Kdm1aQ6ZQ88 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Kdm1aQ6ZQ88 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.02■□□□□ 0.8
Kdm1aQ6ZQ88 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.02■□□□□ 0.8
Kdm1aQ6ZQ88 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Kdm1aQ6ZQ88 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.02■□□□□ 0.8
Kdm1aQ6ZQ88 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Kdm1aQ6ZQ88 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Kdm1aQ6ZQ88 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kdm1aQ6ZQ88 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kdm1aQ6ZQ88 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Kdm1aQ6ZQ88 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Kdm1aQ6ZQ88 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Kdm1aQ6ZQ88 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20■□□□□ 0.79
Kdm1aQ6ZQ88 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20■□□□□ 0.79
Kdm1aQ6ZQ88 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Kdm1aQ6ZQ88 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kdm1aQ6ZQ88 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Kdm1aQ6ZQ88 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20■□□□□ 0.79
Kdm1aQ6ZQ88 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kdm1aQ6ZQ88 Gm44832-201ENSMUST00000208849 2303 ntBASIC20■□□□□ 0.79
Kdm1aQ6ZQ88 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Kdm1aQ6ZQ88 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kdm1aQ6ZQ88 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms