Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx55Q6ZPL9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx55Q6ZPL9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ddx55Q6ZPL9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx55Q6ZPL9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx55Q6ZPL9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx55Q6ZPL9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx55Q6ZPL9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx55Q6ZPL9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx55Q6ZPL9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx55Q6ZPL9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx55Q6ZPL9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.73■□□□□ 0.91
Ddx55Q6ZPL9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ddx55Q6ZPL9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx55Q6ZPL9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx55Q6ZPL9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx55Q6ZPL9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ddx55Q6ZPL9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx55Q6ZPL9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx55Q6ZPL9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx55Q6ZPL9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx55Q6ZPL9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx55Q6ZPL9 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.72■□□□□ 0.91
Ddx55Q6ZPL9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx55Q6ZPL9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx55Q6ZPL9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Ddx55Q6ZPL9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Ddx55Q6ZPL9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.72■□□□□ 0.91
Ddx55Q6ZPL9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx55Q6ZPL9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ddx55Q6ZPL9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ddx55Q6ZPL9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx55Q6ZPL9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx55Q6ZPL9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx55Q6ZPL9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ddx55Q6ZPL9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ddx55Q6ZPL9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx55Q6ZPL9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx55Q6ZPL9 Gm2274-201ENSMUST00000184539 609 ntBASIC20.71■□□□□ 0.91
Ddx55Q6ZPL9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ddx55Q6ZPL9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ddx55Q6ZPL9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx55Q6ZPL9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx55Q6ZPL9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx55Q6ZPL9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx55Q6ZPL9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx55Q6ZPL9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx55Q6ZPL9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Ddx55Q6ZPL9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx55Q6ZPL9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx55Q6ZPL9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx55Q6ZPL9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ddx55Q6ZPL9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Ddx55Q6ZPL9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ddx55Q6ZPL9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx55Q6ZPL9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx55Q6ZPL9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx55Q6ZPL9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx55Q6ZPL9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx55Q6ZPL9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx55Q6ZPL9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx55Q6ZPL9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx55Q6ZPL9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx55Q6ZPL9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx55Q6ZPL9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx55Q6ZPL9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx55Q6ZPL9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx55Q6ZPL9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx55Q6ZPL9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx55Q6ZPL9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx55Q6ZPL9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.69■□□□□ 0.9
Ddx55Q6ZPL9 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.69■□□□□ 0.9
Ddx55Q6ZPL9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx55Q6ZPL9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx55Q6ZPL9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ddx55Q6ZPL9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx55Q6ZPL9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx55Q6ZPL9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx55Q6ZPL9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx55Q6ZPL9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx55Q6ZPL9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ddx55Q6ZPL9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ddx55Q6ZPL9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ddx55Q6ZPL9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx55Q6ZPL9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx55Q6ZPL9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx55Q6ZPL9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ddx55Q6ZPL9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx55Q6ZPL9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx55Q6ZPL9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx55Q6ZPL9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx55Q6ZPL9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx55Q6ZPL9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx55Q6ZPL9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ddx55Q6ZPL9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx55Q6ZPL9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx55Q6ZPL9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx55Q6ZPL9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx55Q6ZPL9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ddx55Q6ZPL9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms