Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rif1Q6PR54 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rif1Q6PR54 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rif1Q6PR54 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rif1Q6PR54 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rif1Q6PR54 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rif1Q6PR54 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Rif1Q6PR54 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rif1Q6PR54 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rif1Q6PR54 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rif1Q6PR54 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rif1Q6PR54 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rif1Q6PR54 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rif1Q6PR54 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rif1Q6PR54 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rif1Q6PR54 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rif1Q6PR54 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rif1Q6PR54 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rif1Q6PR54 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rif1Q6PR54 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rif1Q6PR54 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rif1Q6PR54 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rif1Q6PR54 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.25■□□□□ 0.03
Rif1Q6PR54 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rif1Q6PR54 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rif1Q6PR54 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rif1Q6PR54 Gm27389-201ENSMUST00000183622 195 ntBASIC15.25■□□□□ 0.03
Rif1Q6PR54 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rif1Q6PR54 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rif1Q6PR54 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rif1Q6PR54 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rif1Q6PR54 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rif1Q6PR54 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rif1Q6PR54 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.25■□□□□ 0.03
Rif1Q6PR54 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rif1Q6PR54 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rif1Q6PR54 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.24■□□□□ 0.03
Rif1Q6PR54 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.24■□□□□ 0.03
Rif1Q6PR54 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rif1Q6PR54 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rif1Q6PR54 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rif1Q6PR54 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rif1Q6PR54 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rif1Q6PR54 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rif1Q6PR54 Gm15920-201ENSMUST00000118998 402 ntBASIC15.24■□□□□ 0.03
Rif1Q6PR54 Gm11950-201ENSMUST00000121615 838 ntBASIC15.24■□□□□ 0.03
Rif1Q6PR54 Gm11452-201ENSMUST00000122376 690 ntBASIC15.24■□□□□ 0.03
Rif1Q6PR54 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.24■□□□□ 0.03
Rif1Q6PR54 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.24■□□□□ 0.03
Rif1Q6PR54 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rif1Q6PR54 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rif1Q6PR54 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rif1Q6PR54 Gm13474-201ENSMUST00000122466 815 ntBASIC15.24■□□□□ 0.03
Rif1Q6PR54 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rif1Q6PR54 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.24■□□□□ 0.03
Rif1Q6PR54 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.24■□□□□ 0.03
Rif1Q6PR54 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rif1Q6PR54 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rif1Q6PR54 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rif1Q6PR54 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rif1Q6PR54 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rif1Q6PR54 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Rif1Q6PR54 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rif1Q6PR54 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rif1Q6PR54 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.23■□□□□ 0.03
Rif1Q6PR54 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rif1Q6PR54 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rif1Q6PR54 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rif1Q6PR54 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rif1Q6PR54 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rif1Q6PR54 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.23■□□□□ 0.03
Rif1Q6PR54 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.23■□□□□ 0.03
Rif1Q6PR54 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.23■□□□□ 0.03
Rif1Q6PR54 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rif1Q6PR54 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rif1Q6PR54 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rif1Q6PR54 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rif1Q6PR54 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rif1Q6PR54 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.22■□□□□ 0.03
Rif1Q6PR54 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rif1Q6PR54 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms