Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim45Q6PFY8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim45Q6PFY8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim45Q6PFY8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.16■□□□□ 0.34
Trim45Q6PFY8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim45Q6PFY8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim45Q6PFY8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim45Q6PFY8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim45Q6PFY8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim45Q6PFY8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim45Q6PFY8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim45Q6PFY8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim45Q6PFY8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim45Q6PFY8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.15■□□□□ 0.34
Trim45Q6PFY8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trim45Q6PFY8 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.15■□□□□ 0.34
Trim45Q6PFY8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim45Q6PFY8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim45Q6PFY8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim45Q6PFY8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim45Q6PFY8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim45Q6PFY8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim45Q6PFY8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim45Q6PFY8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim45Q6PFY8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim45Q6PFY8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim45Q6PFY8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim45Q6PFY8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim45Q6PFY8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.13■□□□□ 0.33
Trim45Q6PFY8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim45Q6PFY8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Trim45Q6PFY8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.13■□□□□ 0.33
Trim45Q6PFY8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim45Q6PFY8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim45Q6PFY8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim45Q6PFY8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim45Q6PFY8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Trim45Q6PFY8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim45Q6PFY8 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.13■□□□□ 0.33
Trim45Q6PFY8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim45Q6PFY8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim45Q6PFY8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim45Q6PFY8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim45Q6PFY8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trim45Q6PFY8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim45Q6PFY8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Trim45Q6PFY8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim45Q6PFY8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.12■□□□□ 0.33
Trim45Q6PFY8 Gm5408-201ENSMUST00000197998 747 ntBASIC17.12■□□□□ 0.33
Trim45Q6PFY8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim45Q6PFY8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim45Q6PFY8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim45Q6PFY8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim45Q6PFY8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim45Q6PFY8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim45Q6PFY8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim45Q6PFY8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim45Q6PFY8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Trim45Q6PFY8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim45Q6PFY8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim45Q6PFY8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim45Q6PFY8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms