Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Nup98Q6PFD9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nup98Q6PFD9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
Nup98Q6PFD9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nup98Q6PFD9 Notumos-201ENSMUST00000151998 2659 ntBASIC21.53■■□□□ 1.04
Nup98Q6PFD9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Nup98Q6PFD9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Nup98Q6PFD9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.52■■□□□ 1.04
Nup98Q6PFD9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nup98Q6PFD9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Nup98Q6PFD9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nup98Q6PFD9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nup98Q6PFD9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nup98Q6PFD9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nup98Q6PFD9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nup98Q6PFD9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.52■■□□□ 1.04
Nup98Q6PFD9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Nup98Q6PFD9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Nup98Q6PFD9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nup98Q6PFD9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nup98Q6PFD9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nup98Q6PFD9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nup98Q6PFD9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.52■■□□□ 1.04
Nup98Q6PFD9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nup98Q6PFD9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Nup98Q6PFD9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nup98Q6PFD9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nup98Q6PFD9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nup98Q6PFD9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nup98Q6PFD9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nup98Q6PFD9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nup98Q6PFD9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.5■■□□□ 1.03
Nup98Q6PFD9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.5■■□□□ 1.03
Nup98Q6PFD9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nup98Q6PFD9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nup98Q6PFD9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nup98Q6PFD9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.5■■□□□ 1.03
Nup98Q6PFD9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nup98Q6PFD9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nup98Q6PFD9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nup98Q6PFD9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nup98Q6PFD9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nup98Q6PFD9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nup98Q6PFD9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nup98Q6PFD9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nup98Q6PFD9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nup98Q6PFD9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nup98Q6PFD9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Nup98Q6PFD9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nup98Q6PFD9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.49■■□□□ 1.03
Nup98Q6PFD9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nup98Q6PFD9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nup98Q6PFD9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nup98Q6PFD9 Gm13401-201ENSMUST00000117074 291 ntBASIC21.48■■□□□ 1.03
Nup98Q6PFD9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nup98Q6PFD9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Nup98Q6PFD9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Nup98Q6PFD9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.48■■□□□ 1.03
Nup98Q6PFD9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Nup98Q6PFD9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nup98Q6PFD9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nup98Q6PFD9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nup98Q6PFD9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.48■■□□□ 1.03
Nup98Q6PFD9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Nup98Q6PFD9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.48■■□□□ 1.03
Nup98Q6PFD9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nup98Q6PFD9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nup98Q6PFD9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nup98Q6PFD9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nup98Q6PFD9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Nup98Q6PFD9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Nup98Q6PFD9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nup98Q6PFD9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nup98Q6PFD9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nup98Q6PFD9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Nup98Q6PFD9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nup98Q6PFD9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Nup98Q6PFD9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nup98Q6PFD9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nup98Q6PFD9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.46■■□□□ 1.03
Nup98Q6PFD9 Gm10418-201ENSMUST00000100943 576 ntBASIC21.46■■□□□ 1.03
Nup98Q6PFD9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nup98Q6PFD9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nup98Q6PFD9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Nup98Q6PFD9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nup98Q6PFD9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.45■■□□□ 1.03
Nup98Q6PFD9 Gm38027-201ENSMUST00000192315 235 ntBASIC21.45■■□□□ 1.03
Nup98Q6PFD9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nup98Q6PFD9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nup98Q6PFD9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nup98Q6PFD9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nup98Q6PFD9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nup98Q6PFD9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nup98Q6PFD9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nup98Q6PFD9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nup98Q6PFD9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.45■■□□□ 1.02
Nup98Q6PFD9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nup98Q6PFD9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.45■■□□□ 1.02
Nup98Q6PFD9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nup98Q6PFD9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms