Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CtifQ6PEE2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CtifQ6PEE2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CtifQ6PEE2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CtifQ6PEE2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CtifQ6PEE2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.33■□□□□ 0.68
CtifQ6PEE2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.33■□□□□ 0.68
CtifQ6PEE2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CtifQ6PEE2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CtifQ6PEE2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CtifQ6PEE2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CtifQ6PEE2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CtifQ6PEE2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CtifQ6PEE2 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.32■□□□□ 0.68
CtifQ6PEE2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.32■□□□□ 0.68
CtifQ6PEE2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CtifQ6PEE2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
CtifQ6PEE2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CtifQ6PEE2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CtifQ6PEE2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CtifQ6PEE2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CtifQ6PEE2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CtifQ6PEE2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CtifQ6PEE2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CtifQ6PEE2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CtifQ6PEE2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CtifQ6PEE2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CtifQ6PEE2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CtifQ6PEE2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.31■□□□□ 0.68
CtifQ6PEE2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CtifQ6PEE2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CtifQ6PEE2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
CtifQ6PEE2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CtifQ6PEE2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.31■□□□□ 0.68
CtifQ6PEE2 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.31■□□□□ 0.68
CtifQ6PEE2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CtifQ6PEE2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CtifQ6PEE2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CtifQ6PEE2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CtifQ6PEE2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
CtifQ6PEE2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CtifQ6PEE2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CtifQ6PEE2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CtifQ6PEE2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CtifQ6PEE2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CtifQ6PEE2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.3■□□□□ 0.68
CtifQ6PEE2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.3■□□□□ 0.68
CtifQ6PEE2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.3■□□□□ 0.68
CtifQ6PEE2 Gm40881-201ENSMUST00000223397 166 ntBASIC19.3■□□□□ 0.68
CtifQ6PEE2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CtifQ6PEE2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CtifQ6PEE2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CtifQ6PEE2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CtifQ6PEE2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CtifQ6PEE2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.29■□□□□ 0.68
CtifQ6PEE2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CtifQ6PEE2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CtifQ6PEE2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CtifQ6PEE2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.29■□□□□ 0.68
CtifQ6PEE2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CtifQ6PEE2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CtifQ6PEE2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CtifQ6PEE2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CtifQ6PEE2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CtifQ6PEE2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CtifQ6PEE2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.28■□□□□ 0.68
CtifQ6PEE2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CtifQ6PEE2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CtifQ6PEE2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CtifQ6PEE2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.28■□□□□ 0.68
CtifQ6PEE2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CtifQ6PEE2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CtifQ6PEE2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CtifQ6PEE2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.28■□□□□ 0.68
CtifQ6PEE2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.28■□□□□ 0.68
CtifQ6PEE2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CtifQ6PEE2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CtifQ6PEE2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CtifQ6PEE2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CtifQ6PEE2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CtifQ6PEE2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CtifQ6PEE2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CtifQ6PEE2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CtifQ6PEE2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CtifQ6PEE2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CtifQ6PEE2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CtifQ6PEE2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CtifQ6PEE2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CtifQ6PEE2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.27■□□□□ 0.68
CtifQ6PEE2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CtifQ6PEE2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CtifQ6PEE2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CtifQ6PEE2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CtifQ6PEE2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CtifQ6PEE2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CtifQ6PEE2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
CtifQ6PEE2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
CtifQ6PEE2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CtifQ6PEE2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CtifQ6PEE2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms