Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Golgb1-201ENSMUST00000023534 498 ntBASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf220Q6PDX6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rnf220Q6PDX6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Rnf220Q6PDX6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rnf220Q6PDX6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf220Q6PDX6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf220Q6PDX6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Rnf220Q6PDX6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rnf220Q6PDX6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.14■□□□□ 0.33
Rnf220Q6PDX6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf220Q6PDX6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf220Q6PDX6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf220Q6PDX6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.14■□□□□ 0.33
Rnf220Q6PDX6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rnf220Q6PDX6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf220Q6PDX6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf220Q6PDX6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf220Q6PDX6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rnf220Q6PDX6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf220Q6PDX6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf220Q6PDX6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf220Q6PDX6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Gm12922-201ENSMUST00000120626 809 ntBASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf220Q6PDX6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf220Q6PDX6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rnf220Q6PDX6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf220Q6PDX6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf220Q6PDX6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf220Q6PDX6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.12■□□□□ 0.33
Rnf220Q6PDX6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf220Q6PDX6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf220Q6PDX6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Rnf220Q6PDX6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.12■□□□□ 0.33
Rnf220Q6PDX6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf220Q6PDX6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf220Q6PDX6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf220Q6PDX6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf220Q6PDX6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf220Q6PDX6 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.11■□□□□ 0.33
Rnf220Q6PDX6 Haglr-201ENSMUST00000100000 2085 ntBASIC17.11■□□□□ 0.33
Rnf220Q6PDX6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf220Q6PDX6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rnf220Q6PDX6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf220Q6PDX6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.11■□□□□ 0.33
Rnf220Q6PDX6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf220Q6PDX6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms