Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC23.86■■□□□ 1.41
Chd4Q6PDQ2 Gm18959-201ENSMUST00000208954 655 ntBASIC23.86■■□□□ 1.41
Chd4Q6PDQ2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC23.86■■□□□ 1.41
Chd4Q6PDQ2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Chd4Q6PDQ2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC23.86■■□□□ 1.41
Chd4Q6PDQ2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Chd4Q6PDQ2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Chd4Q6PDQ2 Gm38027-201ENSMUST00000192315 235 ntBASIC23.86■■□□□ 1.41
Chd4Q6PDQ2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC23.86■■□□□ 1.41
Chd4Q6PDQ2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Chd4Q6PDQ2 Gm7856-201ENSMUST00000117514 1493 ntBASIC23.86■■□□□ 1.41
Chd4Q6PDQ2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Chd4Q6PDQ2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Chd4Q6PDQ2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Chd4Q6PDQ2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Chd4Q6PDQ2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Chd4Q6PDQ2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Chd4Q6PDQ2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Chd4Q6PDQ2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Chd4Q6PDQ2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Chd4Q6PDQ2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Chd4Q6PDQ2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Chd4Q6PDQ2 Tgds-204ENSMUST00000228543 1594 ntBASIC23.83■■□□□ 1.4
Chd4Q6PDQ2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.4
Chd4Q6PDQ2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Chd4Q6PDQ2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Chd4Q6PDQ2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Chd4Q6PDQ2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Chd4Q6PDQ2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Chd4Q6PDQ2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC23.82■■□□□ 1.4
Chd4Q6PDQ2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Chd4Q6PDQ2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Chd4Q6PDQ2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Chd4Q6PDQ2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Chd4Q6PDQ2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC23.81■■□□□ 1.4
Chd4Q6PDQ2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Chd4Q6PDQ2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Chd4Q6PDQ2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC23.8■■□□□ 1.4
Chd4Q6PDQ2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Chd4Q6PDQ2 Gm10819-201ENSMUST00000099988 561 ntBASIC23.8■■□□□ 1.4
Chd4Q6PDQ2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Chd4Q6PDQ2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Chd4Q6PDQ2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
Chd4Q6PDQ2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Chd4Q6PDQ2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Chd4Q6PDQ2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Chd4Q6PDQ2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Chd4Q6PDQ2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Chd4Q6PDQ2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Chd4Q6PDQ2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Chd4Q6PDQ2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Chd4Q6PDQ2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Chd4Q6PDQ2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
Chd4Q6PDQ2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC23.79■■□□□ 1.4
Chd4Q6PDQ2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chd4Q6PDQ2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chd4Q6PDQ2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Chd4Q6PDQ2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chd4Q6PDQ2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC23.78■■□□□ 1.4
Chd4Q6PDQ2 Gm43353-201ENSMUST00000199224 1295 ntBASIC23.78■■□□□ 1.4
Chd4Q6PDQ2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Chd4Q6PDQ2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chd4Q6PDQ2 Gm13401-201ENSMUST00000117074 291 ntBASIC23.78■■□□□ 1.4
Chd4Q6PDQ2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC23.78■■□□□ 1.4
Chd4Q6PDQ2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Chd4Q6PDQ2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Chd4Q6PDQ2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chd4Q6PDQ2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Chd4Q6PDQ2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Chd4Q6PDQ2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Chd4Q6PDQ2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Chd4Q6PDQ2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Chd4Q6PDQ2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Chd4Q6PDQ2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Chd4Q6PDQ2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC23.77■■□□□ 1.4
Chd4Q6PDQ2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Chd4Q6PDQ2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Chd4Q6PDQ2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC23.76■■□□□ 1.39
Chd4Q6PDQ2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms