Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smarcc2Q6PDG5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smarcc2Q6PDG5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Smarcc2Q6PDG5 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.14■□□□□ 0.97
Smarcc2Q6PDG5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc2Q6PDG5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc2Q6PDG5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.14■□□□□ 0.97
Smarcc2Q6PDG5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Smarcc2Q6PDG5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.14■□□□□ 0.97
Smarcc2Q6PDG5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc2Q6PDG5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc2Q6PDG5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc2Q6PDG5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc2Q6PDG5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Smarcc2Q6PDG5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc2Q6PDG5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc2Q6PDG5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Smarcc2Q6PDG5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcc2Q6PDG5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcc2Q6PDG5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Smarcc2Q6PDG5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcc2Q6PDG5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcc2Q6PDG5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.12■□□□□ 0.97
Smarcc2Q6PDG5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Smarcc2Q6PDG5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Smarcc2Q6PDG5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcc2Q6PDG5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcc2Q6PDG5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcc2Q6PDG5 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.11■□□□□ 0.97
Smarcc2Q6PDG5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.11■□□□□ 0.97
Smarcc2Q6PDG5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcc2Q6PDG5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcc2Q6PDG5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcc2Q6PDG5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcc2Q6PDG5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcc2Q6PDG5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcc2Q6PDG5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcc2Q6PDG5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarcc2Q6PDG5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarcc2Q6PDG5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarcc2Q6PDG5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarcc2Q6PDG5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarcc2Q6PDG5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Smarcc2Q6PDG5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.1■□□□□ 0.97
Smarcc2Q6PDG5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarcc2Q6PDG5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.1■□□□□ 0.97
Smarcc2Q6PDG5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarcc2Q6PDG5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarcc2Q6PDG5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarcc2Q6PDG5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.1■□□□□ 0.97
Smarcc2Q6PDG5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.1■□□□□ 0.97
Smarcc2Q6PDG5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 Gm26524-201ENSMUST00000192339 390 ntBASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smarcc2Q6PDG5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.08■□□□□ 0.97
Smarcc2Q6PDG5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smarcc2Q6PDG5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.08■□□□□ 0.97
Smarcc2Q6PDG5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.08■□□□□ 0.97
Smarcc2Q6PDG5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smarcc2Q6PDG5 Rab3c-203ENSMUST00000224180 967 ntBASIC21.08■□□□□ 0.97
Smarcc2Q6PDG5 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.08■□□□□ 0.97
Smarcc2Q6PDG5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smarcc2Q6PDG5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smarcc2Q6PDG5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms