Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox16Q62247 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sox16Q62247 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox16Q62247 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox16Q62247 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sox16Q62247 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sox16Q62247 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox16Q62247 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Sox16Q62247 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox16Q62247 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sox16Q62247 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox16Q62247 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox16Q62247 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox16Q62247 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sox16Q62247 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox16Q62247 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox16Q62247 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sox16Q62247 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox16Q62247 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox16Q62247 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox16Q62247 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Sox16Q62247 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox16Q62247 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox16Q62247 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC10.33□□□□□ -0.76
Sox16Q62247 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Sox16Q62247 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox16Q62247 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sox16Q62247 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sox16Q62247 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sox16Q62247 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sox16Q62247 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox16Q62247 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox16Q62247 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox16Q62247 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox16Q62247 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Sox16Q62247 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC10.33□□□□□ -0.76
Sox16Q62247 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox16Q62247 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sox16Q62247 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox16Q62247 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sox16Q62247 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox16Q62247 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox16Q62247 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC10.33□□□□□ -0.76
Sox16Q62247 Rubie-203ENSMUST00000227803 2430 ntBASIC10.33□□□□□ -0.76
Sox16Q62247 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox16Q62247 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox16Q62247 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Sox16Q62247 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC10.32□□□□□ -0.76
Sox16Q62247 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Sox16Q62247 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Sox16Q62247 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sox16Q62247 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Sox16Q62247 Fcho2-208ENSMUST00000224992 2964 ntBASIC10.32□□□□□ -0.76
Sox16Q62247 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Sox16Q62247 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC10.32□□□□□ -0.76
Sox16Q62247 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Sox16Q62247 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC10.32□□□□□ -0.76
Sox16Q62247 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sox16Q62247 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Sox16Q62247 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sox16Q62247 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox16Q62247 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox16Q62247 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox16Q62247 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Sox16Q62247 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Sox16Q62247 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sox16Q62247 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox16Q62247 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox16Q62247 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox16Q62247 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sox16Q62247 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox16Q62247 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sox16Q62247 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox16Q62247 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox16Q62247 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox16Q62247 AL845457.1-201ENSMUST00000197244 68 ntBASIC10.31□□□□□ -0.76
Sox16Q62247 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Sox16Q62247 CT025610.1-201ENSMUST00000224552 1786 ntBASIC10.31□□□□□ -0.76
Sox16Q62247 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox16Q62247 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sox16Q62247 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Sox16Q62247 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms