Protein–RNA interactions for Protein: Q62179

Sema4b, Semaphorin-4B, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema4bQ62179 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sema4bQ62179 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.31■□□□□ 0.68
Sema4bQ62179 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.31■□□□□ 0.68
Sema4bQ62179 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Sema4bQ62179 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sema4bQ62179 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sema4bQ62179 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sema4bQ62179 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sema4bQ62179 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sema4bQ62179 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sema4bQ62179 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sema4bQ62179 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sema4bQ62179 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sema4bQ62179 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sema4bQ62179 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sema4bQ62179 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Sema4bQ62179 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.3■□□□□ 0.68
Sema4bQ62179 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sema4bQ62179 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Sema4bQ62179 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sema4bQ62179 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sema4bQ62179 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sema4bQ62179 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sema4bQ62179 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sema4bQ62179 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sema4bQ62179 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sema4bQ62179 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sema4bQ62179 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sema4bQ62179 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sema4bQ62179 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Sema4bQ62179 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sema4bQ62179 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sema4bQ62179 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sema4bQ62179 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sema4bQ62179 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sema4bQ62179 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sema4bQ62179 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sema4bQ62179 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.28■□□□□ 0.68
Sema4bQ62179 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sema4bQ62179 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.28■□□□□ 0.68
Sema4bQ62179 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sema4bQ62179 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sema4bQ62179 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.28■□□□□ 0.68
Sema4bQ62179 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.28■□□□□ 0.68
Sema4bQ62179 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sema4bQ62179 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sema4bQ62179 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Sema4bQ62179 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sema4bQ62179 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sema4bQ62179 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sema4bQ62179 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sema4bQ62179 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sema4bQ62179 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sema4bQ62179 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.27■□□□□ 0.68
Sema4bQ62179 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sema4bQ62179 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.27■□□□□ 0.68
Sema4bQ62179 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sema4bQ62179 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sema4bQ62179 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.27■□□□□ 0.68
Sema4bQ62179 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sema4bQ62179 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sema4bQ62179 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sema4bQ62179 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Sema4bQ62179 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sema4bQ62179 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Sema4bQ62179 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Sema4bQ62179 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sema4bQ62179 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sema4bQ62179 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sema4bQ62179 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sema4bQ62179 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sema4bQ62179 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sema4bQ62179 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.26■□□□□ 0.67
Sema4bQ62179 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Sema4bQ62179 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sema4bQ62179 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Sema4bQ62179 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Sema4bQ62179 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sema4bQ62179 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sema4bQ62179 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sema4bQ62179 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sema4bQ62179 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sema4bQ62179 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sema4bQ62179 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.26■□□□□ 0.67
Sema4bQ62179 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sema4bQ62179 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema4bQ62179 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema4bQ62179 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema4bQ62179 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sema4bQ62179 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Sema4bQ62179 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema4bQ62179 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.25■□□□□ 0.67
Sema4bQ62179 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema4bQ62179 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sema4bQ62179 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema4bQ62179 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema4bQ62179 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema4bQ62179 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema4bQ62179 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sema4bQ62179 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms