Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rai1Q61818 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.56■□□□□ 0.4
Rai1Q61818 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rai1Q61818 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rai1Q61818 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.56■□□□□ 0.4
Rai1Q61818 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rai1Q61818 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rai1Q61818 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Rai1Q61818 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rai1Q61818 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rai1Q61818 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rai1Q61818 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Rai1Q61818 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rai1Q61818 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.56■□□□□ 0.4
Rai1Q61818 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.56■□□□□ 0.4
Rai1Q61818 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.56■□□□□ 0.4
Rai1Q61818 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rai1Q61818 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rai1Q61818 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rai1Q61818 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rai1Q61818 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rai1Q61818 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.55■□□□□ 0.4
Rai1Q61818 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rai1Q61818 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.55■□□□□ 0.4
Rai1Q61818 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rai1Q61818 Gm45058-201ENSMUST00000205810 766 ntBASIC17.55■□□□□ 0.4
Rai1Q61818 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.55■□□□□ 0.4
Rai1Q61818 Gm27463-201ENSMUST00000183569 57 ntBASIC17.54■□□□□ 0.4
Rai1Q61818 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Rai1Q61818 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rai1Q61818 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rai1Q61818 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rai1Q61818 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rai1Q61818 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rai1Q61818 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rai1Q61818 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.54■□□□□ 0.4
Rai1Q61818 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rai1Q61818 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.54■□□□□ 0.4
Rai1Q61818 Gm10517-202ENSMUST00000192970 758 ntBASIC17.54■□□□□ 0.4
Rai1Q61818 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rai1Q61818 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rai1Q61818 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.53■□□□□ 0.4
Rai1Q61818 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rai1Q61818 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rai1Q61818 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rai1Q61818 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rai1Q61818 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rai1Q61818 AA414768-201ENSMUST00000121924 1257 ntBASIC17.53■□□□□ 0.4
Rai1Q61818 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rai1Q61818 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rai1Q61818 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rai1Q61818 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rai1Q61818 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rai1Q61818 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rai1Q61818 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.53■□□□□ 0.4
Rai1Q61818 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rai1Q61818 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rai1Q61818 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rai1Q61818 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rai1Q61818 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rai1Q61818 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rai1Q61818 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rai1Q61818 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rai1Q61818 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.52■□□□□ 0.4
Rai1Q61818 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rai1Q61818 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rai1Q61818 Gm38027-201ENSMUST00000192315 235 ntBASIC17.52■□□□□ 0.39
Rai1Q61818 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rai1Q61818 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rai1Q61818 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rai1Q61818 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rai1Q61818 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rai1Q61818 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rai1Q61818 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rai1Q61818 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rai1Q61818 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rai1Q61818 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rai1Q61818 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rai1Q61818 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rai1Q61818 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rai1Q61818 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rai1Q61818 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rai1Q61818 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rai1Q61818 Gm27741-201ENSMUST00000185060 237 ntBASIC17.51■□□□□ 0.39
Rai1Q61818 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rai1Q61818 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rai1Q61818 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rai1Q61818 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rai1Q61818 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rai1Q61818 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rai1Q61818 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rai1Q61818 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rai1Q61818 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rai1Q61818 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rai1Q61818 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rai1Q61818 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rai1Q61818 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Rai1Q61818 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rai1Q61818 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rai1Q61818 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms