Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ift88Q61371 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ift88Q61371 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ift88Q61371 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ift88Q61371 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ift88Q61371 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ift88Q61371 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ift88Q61371 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.08■□□□□ 0.8
Ift88Q61371 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ift88Q61371 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Ift88Q61371 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ift88Q61371 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ift88Q61371 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ift88Q61371 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ift88Q61371 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ift88Q61371 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ift88Q61371 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ift88Q61371 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.07■□□□□ 0.8
Ift88Q61371 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ift88Q61371 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ift88Q61371 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Ift88Q61371 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ift88Q61371 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ift88Q61371 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ift88Q61371 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ift88Q61371 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ift88Q61371 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ift88Q61371 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.06■□□□□ 0.8
Ift88Q61371 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ift88Q61371 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ift88Q61371 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ift88Q61371 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ift88Q61371 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ift88Q61371 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ift88Q61371 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ift88Q61371 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ift88Q61371 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Ift88Q61371 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ift88Q61371 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ift88Q61371 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ift88Q61371 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ift88Q61371 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ift88Q61371 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ift88Q61371 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.05■□□□□ 0.8
Ift88Q61371 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.05■□□□□ 0.8
Ift88Q61371 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.05■□□□□ 0.8
Ift88Q61371 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.05■□□□□ 0.8
Ift88Q61371 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ift88Q61371 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ift88Q61371 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.05■□□□□ 0.8
Ift88Q61371 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ift88Q61371 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ift88Q61371 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.05■□□□□ 0.8
Ift88Q61371 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ift88Q61371 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ift88Q61371 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ift88Q61371 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ift88Q61371 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ift88Q61371 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ift88Q61371 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.05■□□□□ 0.8
Ift88Q61371 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ift88Q61371 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ift88Q61371 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ift88Q61371 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ift88Q61371 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ift88Q61371 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ift88Q61371 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ift88Q61371 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.04■□□□□ 0.8
Ift88Q61371 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ift88Q61371 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ift88Q61371 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ift88Q61371 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.04■□□□□ 0.8
Ift88Q61371 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ift88Q61371 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ift88Q61371 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ift88Q61371 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ift88Q61371 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.04■□□□□ 0.8
Ift88Q61371 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ift88Q61371 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.04■□□□□ 0.8
Ift88Q61371 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ift88Q61371 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ift88Q61371 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.03■□□□□ 0.8
Ift88Q61371 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ift88Q61371 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ift88Q61371 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ift88Q61371 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ift88Q61371 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ift88Q61371 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ift88Q61371 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Ift88Q61371 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ift88Q61371 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ift88Q61371 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ift88Q61371 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ift88Q61371 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ift88Q61371 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ift88Q61371 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ift88Q61371 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Ift88Q61371 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ift88Q61371 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ift88Q61371 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms