Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.41■□□□□ 0.54
Sdf4Q61112 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sdf4Q61112 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Sdf4Q61112 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdf4Q61112 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sdf4Q61112 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdf4Q61112 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdf4Q61112 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdf4Q61112 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.41■□□□□ 0.54
Sdf4Q61112 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdf4Q61112 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdf4Q61112 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdf4Q61112 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sdf4Q61112 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdf4Q61112 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdf4Q61112 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Sdf4Q61112 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Sdf4Q61112 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sdf4Q61112 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.4■□□□□ 0.54
Sdf4Q61112 Gm26524-201ENSMUST00000192339 390 ntBASIC18.4■□□□□ 0.54
Sdf4Q61112 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdf4Q61112 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sdf4Q61112 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdf4Q61112 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sdf4Q61112 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Sdf4Q61112 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdf4Q61112 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdf4Q61112 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Sdf4Q61112 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sdf4Q61112 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sdf4Q61112 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sdf4Q61112 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdf4Q61112 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdf4Q61112 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdf4Q61112 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sdf4Q61112 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdf4Q61112 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdf4Q61112 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdf4Q61112 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdf4Q61112 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdf4Q61112 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sdf4Q61112 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdf4Q61112 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdf4Q61112 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.38■□□□□ 0.53
Sdf4Q61112 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdf4Q61112 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Sdf4Q61112 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdf4Q61112 Gm5408-201ENSMUST00000197998 747 ntBASIC18.38■□□□□ 0.53
Sdf4Q61112 Rab3c-203ENSMUST00000224180 967 ntBASIC18.38■□□□□ 0.53
Sdf4Q61112 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdf4Q61112 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdf4Q61112 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sdf4Q61112 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.38■□□□□ 0.53
Sdf4Q61112 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdf4Q61112 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sdf4Q61112 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdf4Q61112 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdf4Q61112 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sdf4Q61112 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sdf4Q61112 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdf4Q61112 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdf4Q61112 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.37■□□□□ 0.53
Sdf4Q61112 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sdf4Q61112 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.37■□□□□ 0.53
Sdf4Q61112 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdf4Q61112 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sdf4Q61112 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdf4Q61112 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdf4Q61112 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdf4Q61112 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.37■□□□□ 0.53
Sdf4Q61112 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdf4Q61112 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sdf4Q61112 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdf4Q61112 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdf4Q61112 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdf4Q61112 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sdf4Q61112 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdf4Q61112 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.36■□□□□ 0.53
Sdf4Q61112 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdf4Q61112 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.36■□□□□ 0.53
Sdf4Q61112 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdf4Q61112 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdf4Q61112 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sdf4Q61112 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdf4Q61112 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdf4Q61112 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdf4Q61112 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdf4Q61112 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdf4Q61112 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdf4Q61112 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.35■□□□□ 0.53
Sdf4Q61112 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdf4Q61112 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdf4Q61112 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdf4Q61112 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.35■□□□□ 0.53
Sdf4Q61112 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.35■□□□□ 0.53
Sdf4Q61112 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sdf4Q61112 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sdf4Q61112 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sdf4Q61112 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Sdf4Q61112 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms