Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ClpbQ60649 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ClpbQ60649 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClpbQ60649 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClpbQ60649 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClpbQ60649 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ClpbQ60649 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ClpbQ60649 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
ClpbQ60649 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClpbQ60649 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClpbQ60649 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClpbQ60649 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClpbQ60649 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClpbQ60649 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClpbQ60649 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClpbQ60649 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ClpbQ60649 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClpbQ60649 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClpbQ60649 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClpbQ60649 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ClpbQ60649 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ClpbQ60649 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.37■□□□□ 0.37
ClpbQ60649 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ClpbQ60649 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClpbQ60649 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClpbQ60649 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
ClpbQ60649 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClpbQ60649 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClpbQ60649 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ClpbQ60649 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.37■□□□□ 0.37
ClpbQ60649 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClpbQ60649 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClpbQ60649 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
ClpbQ60649 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.36■□□□□ 0.37
ClpbQ60649 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ClpbQ60649 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.36■□□□□ 0.37
ClpbQ60649 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ClpbQ60649 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.36■□□□□ 0.37
ClpbQ60649 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ClpbQ60649 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ClpbQ60649 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ClpbQ60649 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClpbQ60649 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClpbQ60649 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ClpbQ60649 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClpbQ60649 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClpbQ60649 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.36■□□□□ 0.37
ClpbQ60649 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ClpbQ60649 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClpbQ60649 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClpbQ60649 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.35■□□□□ 0.37
ClpbQ60649 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClpbQ60649 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ClpbQ60649 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ClpbQ60649 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClpbQ60649 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClpbQ60649 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ClpbQ60649 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClpbQ60649 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClpbQ60649 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClpbQ60649 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.35■□□□□ 0.37
ClpbQ60649 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.35■□□□□ 0.37
ClpbQ60649 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClpbQ60649 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.35■□□□□ 0.37
ClpbQ60649 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClpbQ60649 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
ClpbQ60649 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClpbQ60649 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.35■□□□□ 0.37
ClpbQ60649 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClpbQ60649 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ClpbQ60649 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClpbQ60649 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClpbQ60649 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClpbQ60649 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ClpbQ60649 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.34■□□□□ 0.37
ClpbQ60649 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ClpbQ60649 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ClpbQ60649 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.34■□□□□ 0.37
ClpbQ60649 Gm27011-201ENSMUST00000182352 972 ntBASIC17.34■□□□□ 0.37
ClpbQ60649 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.34■□□□□ 0.37
ClpbQ60649 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.34■□□□□ 0.37
ClpbQ60649 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClpbQ60649 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClpbQ60649 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClpbQ60649 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClpbQ60649 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.34■□□□□ 0.37
ClpbQ60649 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClpbQ60649 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClpbQ60649 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClpbQ60649 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClpbQ60649 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.33■□□□□ 0.37
ClpbQ60649 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ClpbQ60649 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
ClpbQ60649 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ClpbQ60649 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ClpbQ60649 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ClpbQ60649 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
ClpbQ60649 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.33■□□□□ 0.37
ClpbQ60649 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClpbQ60649 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms