Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ubr3Q5U430 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC22.23■■□□□ 1.15
Ubr3Q5U430 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ubr3Q5U430 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Ubr3Q5U430 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ubr3Q5U430 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ubr3Q5U430 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Ubr3Q5U430 Gm8258-201ENSMUST00000055593 1449 ntBASIC22.23■■□□□ 1.15
Ubr3Q5U430 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ubr3Q5U430 Gm25016-201ENSMUST00000158399 131 ntBASIC22.22■■□□□ 1.15
Ubr3Q5U430 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ubr3Q5U430 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ubr3Q5U430 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ubr3Q5U430 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC22.22■■□□□ 1.15
Ubr3Q5U430 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ubr3Q5U430 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ubr3Q5U430 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ubr3Q5U430 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ubr3Q5U430 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ubr3Q5U430 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
Ubr3Q5U430 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Ubr3Q5U430 Gm7153-201ENSMUST00000117092 455 ntBASIC22.22■■□□□ 1.15
Ubr3Q5U430 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC22.22■■□□□ 1.15
Ubr3Q5U430 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ubr3Q5U430 Mir1668-201ENSMUST00000184114 107 ntBASIC22.22■■□□□ 1.15
Ubr3Q5U430 Gm7791-201ENSMUST00000219066 539 ntBASIC22.22■■□□□ 1.15
Ubr3Q5U430 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ubr3Q5U430 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ubr3Q5U430 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.21■■□□□ 1.15
Ubr3Q5U430 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Ubr3Q5U430 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC22.21■■□□□ 1.15
Ubr3Q5U430 Gm29518-201ENSMUST00000190858 372 ntBASIC22.21■■□□□ 1.15
Ubr3Q5U430 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ubr3Q5U430 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC22.21■■□□□ 1.15
Ubr3Q5U430 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ubr3Q5U430 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
Ubr3Q5U430 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
Ubr3Q5U430 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ubr3Q5U430 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ubr3Q5U430 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC22.2■■□□□ 1.14
Ubr3Q5U430 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Ubr3Q5U430 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ubr3Q5U430 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ubr3Q5U430 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ubr3Q5U430 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
Ubr3Q5U430 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Ubr3Q5U430 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC22.2■■□□□ 1.14
Ubr3Q5U430 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC22.2■■□□□ 1.14
Ubr3Q5U430 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ubr3Q5U430 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ubr3Q5U430 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC22.2■■□□□ 1.14
Ubr3Q5U430 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ubr3Q5U430 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ubr3Q5U430 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Ubr3Q5U430 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ubr3Q5U430 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ubr3Q5U430 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ubr3Q5U430 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ubr3Q5U430 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Ubr3Q5U430 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ubr3Q5U430 Gm18669-201ENSMUST00000216049 778 ntBASIC22.18■■□□□ 1.14
Ubr3Q5U430 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ubr3Q5U430 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ubr3Q5U430 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ubr3Q5U430 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ubr3Q5U430 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr3Q5U430 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr3Q5U430 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr3Q5U430 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr3Q5U430 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr3Q5U430 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr3Q5U430 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr3Q5U430 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Ubr3Q5U430 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr3Q5U430 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr3Q5U430 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC22.16■■□□□ 1.14
Ubr3Q5U430 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ubr3Q5U430 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ubr3Q5U430 AC133598.3-202ENSMUST00000224219 531 ntBASIC22.16■■□□□ 1.14
Ubr3Q5U430 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ubr3Q5U430 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ubr3Q5U430 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ubr3Q5U430 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr3Q5U430 Gm17808-201ENSMUST00000200859 894 ntBASIC22.15■■□□□ 1.14
Ubr3Q5U430 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr3Q5U430 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr3Q5U430 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr3Q5U430 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr3Q5U430 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr3Q5U430 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr3Q5U430 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr3Q5U430 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr3Q5U430 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr3Q5U430 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Ubr3Q5U430 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC22.14■■□□□ 1.14
Ubr3Q5U430 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ubr3Q5U430 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ubr3Q5U430 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Ubr3Q5U430 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ubr3Q5U430 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms