Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps54Q5SPW0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps54Q5SPW0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Vps54Q5SPW0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps54Q5SPW0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.78■■□□□ 1.08
Vps54Q5SPW0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.78■■□□□ 1.08
Vps54Q5SPW0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Vps54Q5SPW0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Vps54Q5SPW0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Vps54Q5SPW0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.78■■□□□ 1.08
Vps54Q5SPW0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.78■■□□□ 1.08
Vps54Q5SPW0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.78■■□□□ 1.08
Vps54Q5SPW0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vps54Q5SPW0 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.78■■□□□ 1.08
Vps54Q5SPW0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
Vps54Q5SPW0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Vps54Q5SPW0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Vps54Q5SPW0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vps54Q5SPW0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vps54Q5SPW0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps54Q5SPW0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps54Q5SPW0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps54Q5SPW0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps54Q5SPW0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps54Q5SPW0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps54Q5SPW0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Vps54Q5SPW0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Vps54Q5SPW0 Gm13158-201ENSMUST00000122007 736 ntBASIC21.77■■□□□ 1.08
Vps54Q5SPW0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Vps54Q5SPW0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps54Q5SPW0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps54Q5SPW0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Vps54Q5SPW0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Vps54Q5SPW0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps54Q5SPW0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
Vps54Q5SPW0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps54Q5SPW0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps54Q5SPW0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Vps54Q5SPW0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.76■■□□□ 1.07
Vps54Q5SPW0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps54Q5SPW0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Vps54Q5SPW0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps54Q5SPW0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.76■■□□□ 1.07
Vps54Q5SPW0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps54Q5SPW0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Vps54Q5SPW0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps54Q5SPW0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.75■■□□□ 1.07
Vps54Q5SPW0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps54Q5SPW0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps54Q5SPW0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps54Q5SPW0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Vps54Q5SPW0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps54Q5SPW0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Vps54Q5SPW0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Vps54Q5SPW0 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.74■■□□□ 1.07
Vps54Q5SPW0 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.74■■□□□ 1.07
Vps54Q5SPW0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps54Q5SPW0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Vps54Q5SPW0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Vps54Q5SPW0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.74■■□□□ 1.07
Vps54Q5SPW0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.74■■□□□ 1.07
Vps54Q5SPW0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Vps54Q5SPW0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Vps54Q5SPW0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps54Q5SPW0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps54Q5SPW0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.74■■□□□ 1.07
Vps54Q5SPW0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Vps54Q5SPW0 Tgds-204ENSMUST00000228543 1594 ntBASIC21.74■■□□□ 1.07
Vps54Q5SPW0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps54Q5SPW0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps54Q5SPW0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Vps54Q5SPW0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Vps54Q5SPW0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Vps54Q5SPW0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps54Q5SPW0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps54Q5SPW0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps54Q5SPW0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Vps54Q5SPW0 Gm10698-201ENSMUST00000182663 604 ntBASIC21.73■■□□□ 1.07
Vps54Q5SPW0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps54Q5SPW0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Vps54Q5SPW0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps54Q5SPW0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vps54Q5SPW0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.72■■□□□ 1.07
Vps54Q5SPW0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.72■■□□□ 1.07
Vps54Q5SPW0 Gm18666-201ENSMUST00000190039 958 ntBASIC21.72■■□□□ 1.07
Vps54Q5SPW0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vps54Q5SPW0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Vps54Q5SPW0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
Vps54Q5SPW0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Vps54Q5SPW0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vps54Q5SPW0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vps54Q5SPW0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.71■■□□□ 1.07
Vps54Q5SPW0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vps54Q5SPW0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps54Q5SPW0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps54Q5SPW0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Vps54Q5SPW0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps54Q5SPW0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.7■■□□□ 1.06
Vps54Q5SPW0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.7■■□□□ 1.06
Vps54Q5SPW0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms