Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.97■□□□□ 0.15
Trav6-2Q5R1I4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-2Q5R1I4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-2Q5R1I4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav6-2Q5R1I4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav6-2Q5R1I4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav6-2Q5R1I4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-2Q5R1I4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-2Q5R1I4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav6-2Q5R1I4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-2Q5R1I4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-2Q5R1I4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav6-2Q5R1I4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav6-2Q5R1I4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-2Q5R1I4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-2Q5R1I4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-2Q5R1I4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.96■□□□□ 0.15
Trav6-2Q5R1I4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-2Q5R1I4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Trav6-2Q5R1I4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.96■□□□□ 0.14
Trav6-2Q5R1I4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.96■□□□□ 0.14
Trav6-2Q5R1I4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.96■□□□□ 0.14
Trav6-2Q5R1I4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 Gm6433-201ENSMUST00000118634 875 ntBASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 Gm37292-201ENSMUST00000192062 758 ntBASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-2Q5R1I4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 Gm43799-201ENSMUST00000201845 579 ntBASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 Gm30025-201ENSMUST00000218555 728 ntBASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav6-2Q5R1I4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Gm21814-202ENSMUST00000203277 873 ntBASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-2Q5R1I4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Timm23-208ENSMUST00000226683 750 ntBASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-2Q5R1I4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms