Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Gm10812-201ENSMUST00000099864 546 ntBASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-4Q5R1I0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-4Q5R1I0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-4Q5R1I0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-4Q5R1I0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-4Q5R1I0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-4Q5R1I0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-4Q5R1I0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-4Q5R1I0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-4Q5R1I0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav6d-4Q5R1I0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Trav6d-4Q5R1I0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-4Q5R1I0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-4Q5R1I0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-4Q5R1I0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav6d-4Q5R1I0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-4Q5R1I0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-4Q5R1I0 Gm38285-201ENSMUST00000192928 922 ntBASIC15.22■□□□□ 0.03
Trav6d-4Q5R1I0 Mtag2-201ENSMUST00000058665 714 ntBASIC15.22■□□□□ 0.03
Trav6d-4Q5R1I0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav6d-4Q5R1I0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav6d-4Q5R1I0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-4Q5R1I0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav6d-4Q5R1I0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-4Q5R1I0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav6d-4Q5R1I0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav6d-4Q5R1I0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6d-4Q5R1I0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6d-4Q5R1I0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav6d-4Q5R1I0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
Trav6d-4Q5R1I0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6d-4Q5R1I0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav6d-4Q5R1I0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6d-4Q5R1I0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-4Q5R1I0 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.2■□□□□ 0.02
Trav6d-4Q5R1I0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-4Q5R1I0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav6d-4Q5R1I0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-4Q5R1I0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav6d-4Q5R1I0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav6d-4Q5R1I0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-4Q5R1I0 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.2■□□□□ 0.02
Trav6d-4Q5R1I0 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.2■□□□□ 0.02
Trav6d-4Q5R1I0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.2■□□□□ 0.02
Trav6d-4Q5R1I0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-4Q5R1I0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-4Q5R1I0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav6d-4Q5R1I0 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.2■□□□□ 0.02
Trav6d-4Q5R1I0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-4Q5R1I0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-4Q5R1I0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav6d-4Q5R1I0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.19■□□□□ 0.02
Trav6d-4Q5R1I0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-4Q5R1I0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-4Q5R1I0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-4Q5R1I0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-4Q5R1I0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-4Q5R1I0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-4Q5R1I0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-4Q5R1I0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav6d-4Q5R1I0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-4Q5R1I0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-4Q5R1I0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.19■□□□□ 0.02
Trav6d-4Q5R1I0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms