Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Bdp1Q571C7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Bdp1Q571C7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Bdp1Q571C7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Bdp1Q571C7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Bdp1Q571C7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Bdp1Q571C7 Gm11594-201ENSMUST00000122313 162 ntBASIC18.5■□□□□ 0.55
Bdp1Q571C7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.5■□□□□ 0.55
Bdp1Q571C7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Bdp1Q571C7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.5■□□□□ 0.55
Bdp1Q571C7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Bdp1Q571C7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Bdp1Q571C7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Bdp1Q571C7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Bdp1Q571C7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Bdp1Q571C7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Bdp1Q571C7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.49■□□□□ 0.55
Bdp1Q571C7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Bdp1Q571C7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Bdp1Q571C7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Bdp1Q571C7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.49■□□□□ 0.55
Bdp1Q571C7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Bdp1Q571C7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Bdp1Q571C7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Bdp1Q571C7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Bdp1Q571C7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Bdp1Q571C7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Bdp1Q571C7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Bdp1Q571C7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Bdp1Q571C7 Gm18195-201ENSMUST00000207604 706 ntBASIC18.48■□□□□ 0.55
Bdp1Q571C7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Bdp1Q571C7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Bdp1Q571C7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.47■□□□□ 0.55
Bdp1Q571C7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Bdp1Q571C7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Bdp1Q571C7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Bdp1Q571C7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Bdp1Q571C7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Bdp1Q571C7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Bdp1Q571C7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Bdp1Q571C7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.47■□□□□ 0.55
Bdp1Q571C7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.47■□□□□ 0.55
Bdp1Q571C7 Gm2651-201ENSMUST00000203560 838 ntBASIC18.47■□□□□ 0.55
Bdp1Q571C7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Bdp1Q571C7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Bdp1Q571C7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Bdp1Q571C7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.46■□□□□ 0.55
Bdp1Q571C7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Bdp1Q571C7 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.46■□□□□ 0.55
Bdp1Q571C7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Bdp1Q571C7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.46■□□□□ 0.55
Bdp1Q571C7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.45■□□□□ 0.54
Bdp1Q571C7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Bdp1Q571C7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.45■□□□□ 0.54
Bdp1Q571C7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Bdp1Q571C7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Bdp1Q571C7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Bdp1Q571C7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Bdp1Q571C7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Bdp1Q571C7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Bdp1Q571C7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.45■□□□□ 0.54
Bdp1Q571C7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Bdp1Q571C7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Bdp1Q571C7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Bdp1Q571C7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Bdp1Q571C7 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.44■□□□□ 0.54
Bdp1Q571C7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Bdp1Q571C7 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.44■□□□□ 0.54
Bdp1Q571C7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.44■□□□□ 0.54
Bdp1Q571C7 Gm11355-201ENSMUST00000121120 306 ntBASIC18.44■□□□□ 0.54
Bdp1Q571C7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
Bdp1Q571C7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Bdp1Q571C7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Bdp1Q571C7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Bdp1Q571C7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Bdp1Q571C7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Bdp1Q571C7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Bdp1Q571C7 Gm13884-201ENSMUST00000118103 829 ntBASIC18.43■□□□□ 0.54
Bdp1Q571C7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Bdp1Q571C7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.43■□□□□ 0.54
Bdp1Q571C7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Bdp1Q571C7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Bdp1Q571C7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Bdp1Q571C7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Bdp1Q571C7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Bdp1Q571C7 Gm7370-201ENSMUST00000219471 767 ntBASIC18.43■□□□□ 0.54
Bdp1Q571C7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Bdp1Q571C7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Bdp1Q571C7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Bdp1Q571C7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.42■□□□□ 0.54
Bdp1Q571C7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Bdp1Q571C7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Bdp1Q571C7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Bdp1Q571C7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Bdp1Q571C7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Bdp1Q571C7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Bdp1Q571C7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Bdp1Q571C7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Bdp1Q571C7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Bdp1Q571C7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms