Protein–RNA interactions for Protein: Q3V3V9

Carmil2, Capping protein, Arp2/3 and myosin-I linker protein 2, mousemouse

Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil2Q3V3V9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil2Q3V3V9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil2Q3V3V9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil2Q3V3V9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 Gm27741-201ENSMUST00000185060 237 ntBASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Carmil2Q3V3V9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil2Q3V3V9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Carmil2Q3V3V9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil2Q3V3V9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Carmil2Q3V3V9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.24■□□□□ 0.83
Carmil2Q3V3V9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil2Q3V3V9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Carmil2Q3V3V9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Carmil2Q3V3V9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil2Q3V3V9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil2Q3V3V9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil2Q3V3V9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil2Q3V3V9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Carmil2Q3V3V9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.23■□□□□ 0.83
Carmil2Q3V3V9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil2Q3V3V9 Grk6-206ENSMUST00000224995 2971 ntBASIC20.23■□□□□ 0.83
Carmil2Q3V3V9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil2Q3V3V9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.23■□□□□ 0.83
Carmil2Q3V3V9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
Carmil2Q3V3V9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil2Q3V3V9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.23■□□□□ 0.83
Carmil2Q3V3V9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil2Q3V3V9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil2Q3V3V9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil2Q3V3V9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Carmil2Q3V3V9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil2Q3V3V9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil2Q3V3V9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Carmil2Q3V3V9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil2Q3V3V9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil2Q3V3V9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil2Q3V3V9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil2Q3V3V9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil2Q3V3V9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil2Q3V3V9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Carmil2Q3V3V9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Carmil2Q3V3V9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.22■□□□□ 0.83
Carmil2Q3V3V9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.22■□□□□ 0.83
Carmil2Q3V3V9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Carmil2Q3V3V9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil2Q3V3V9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil2Q3V3V9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil2Q3V3V9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil2Q3V3V9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Carmil2Q3V3V9 Gm12896-201ENSMUST00000118430 226 ntBASIC20.21■□□□□ 0.83
Carmil2Q3V3V9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.21■□□□□ 0.83
Carmil2Q3V3V9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.21■□□□□ 0.83
Carmil2Q3V3V9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.21■□□□□ 0.83
Carmil2Q3V3V9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil2Q3V3V9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil2Q3V3V9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil2Q3V3V9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Carmil2Q3V3V9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Carmil2Q3V3V9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Carmil2Q3V3V9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Carmil2Q3V3V9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Carmil2Q3V3V9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Carmil2Q3V3V9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Carmil2Q3V3V9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Carmil2Q3V3V9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Carmil2Q3V3V9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.2■□□□□ 0.82
Carmil2Q3V3V9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Carmil2Q3V3V9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Carmil2Q3V3V9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.2■□□□□ 0.82
Carmil2Q3V3V9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.2■□□□□ 0.82
Carmil2Q3V3V9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.2■□□□□ 0.82
Carmil2Q3V3V9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Carmil2Q3V3V9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Carmil2Q3V3V9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Carmil2Q3V3V9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Carmil2Q3V3V9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Carmil2Q3V3V9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Carmil2Q3V3V9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Carmil2Q3V3V9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.19■□□□□ 0.82
Carmil2Q3V3V9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.19■□□□□ 0.82
Carmil2Q3V3V9 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.19■□□□□ 0.82
Carmil2Q3V3V9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.19■□□□□ 0.82
Carmil2Q3V3V9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Carmil2Q3V3V9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms