Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim80Q3V061 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Trim80Q3V061 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim80Q3V061 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim80Q3V061 AV356131-201ENSMUST00000206201 750 ntBASIC18.69■□□□□ 0.58
Trim80Q3V061 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.69■□□□□ 0.58
Trim80Q3V061 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.69■□□□□ 0.58
Trim80Q3V061 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim80Q3V061 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim80Q3V061 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim80Q3V061 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim80Q3V061 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim80Q3V061 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim80Q3V061 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim80Q3V061 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim80Q3V061 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim80Q3V061 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim80Q3V061 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim80Q3V061 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim80Q3V061 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim80Q3V061 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.68■□□□□ 0.58
Trim80Q3V061 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim80Q3V061 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim80Q3V061 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim80Q3V061 Gm10033-202ENSMUST00000211874 928 ntBASIC18.68■□□□□ 0.58
Trim80Q3V061 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim80Q3V061 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim80Q3V061 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim80Q3V061 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim80Q3V061 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim80Q3V061 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim80Q3V061 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim80Q3V061 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim80Q3V061 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim80Q3V061 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.67■□□□□ 0.58
Trim80Q3V061 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim80Q3V061 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim80Q3V061 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim80Q3V061 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim80Q3V061 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim80Q3V061 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim80Q3V061 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim80Q3V061 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim80Q3V061 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim80Q3V061 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.66■□□□□ 0.58
Trim80Q3V061 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.66■□□□□ 0.58
Trim80Q3V061 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim80Q3V061 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim80Q3V061 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim80Q3V061 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim80Q3V061 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim80Q3V061 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim80Q3V061 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim80Q3V061 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim80Q3V061 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim80Q3V061 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.65■□□□□ 0.58
Trim80Q3V061 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim80Q3V061 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim80Q3V061 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim80Q3V061 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim80Q3V061 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim80Q3V061 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim80Q3V061 Gm42778-201ENSMUST00000199644 553 ntBASIC18.65■□□□□ 0.58
Trim80Q3V061 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim80Q3V061 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim80Q3V061 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim80Q3V061 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trim80Q3V061 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim80Q3V061 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.65■□□□□ 0.58
Trim80Q3V061 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim80Q3V061 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim80Q3V061 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.65■□□□□ 0.58
Trim80Q3V061 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim80Q3V061 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Trim80Q3V061 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim80Q3V061 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim80Q3V061 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim80Q3V061 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim80Q3V061 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim80Q3V061 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim80Q3V061 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim80Q3V061 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim80Q3V061 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.63■□□□□ 0.57
Trim80Q3V061 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim80Q3V061 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim80Q3V061 Gm11421-201ENSMUST00000122124 294 ntBASIC18.63■□□□□ 0.57
Trim80Q3V061 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim80Q3V061 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim80Q3V061 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Trim80Q3V061 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim80Q3V061 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim80Q3V061 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim80Q3V061 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim80Q3V061 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim80Q3V061 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim80Q3V061 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim80Q3V061 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim80Q3V061 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim80Q3V061 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim80Q3V061 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms