Protein–RNA interactions for Protein: Q3UZ39

Lrrfip1, Leucine-rich repeat flightless-interacting protein 1, mousemouse

Known RBP Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrfip1Q3UZ39 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Lrrfip1Q3UZ39 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrfip1Q3UZ39 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrfip1Q3UZ39 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Lrrfip1Q3UZ39 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrfip1Q3UZ39 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrfip1Q3UZ39 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrfip1Q3UZ39 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.6■□□□□ 0.89
Lrrfip1Q3UZ39 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrfip1Q3UZ39 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrfip1Q3UZ39 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrfip1Q3UZ39 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrfip1Q3UZ39 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 Gm44549-201ENSMUST00000208351 577 ntBASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 Gm20049-201ENSMUST00000219950 730 ntBASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrfip1Q3UZ39 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrfip1Q3UZ39 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrfip1Q3UZ39 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrfip1Q3UZ39 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrfip1Q3UZ39 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrfip1Q3UZ39 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrfip1Q3UZ39 Gm12527-201ENSMUST00000117967 564 ntBASIC20.58■□□□□ 0.89
Lrrfip1Q3UZ39 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.58■□□□□ 0.89
Lrrfip1Q3UZ39 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.58■□□□□ 0.89
Lrrfip1Q3UZ39 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrfip1Q3UZ39 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrfip1Q3UZ39 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lrrfip1Q3UZ39 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrfip1Q3UZ39 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.57■□□□□ 0.88
Lrrfip1Q3UZ39 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrfip1Q3UZ39 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrfip1Q3UZ39 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.57■□□□□ 0.88
Lrrfip1Q3UZ39 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Lrrfip1Q3UZ39 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrfip1Q3UZ39 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrfip1Q3UZ39 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Lrrfip1Q3UZ39 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrfip1Q3UZ39 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrfip1Q3UZ39 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrfip1Q3UZ39 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrfip1Q3UZ39 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Lrrfip1Q3UZ39 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrfip1Q3UZ39 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrfip1Q3UZ39 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Lrrfip1Q3UZ39 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.56■□□□□ 0.88
Lrrfip1Q3UZ39 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.56■□□□□ 0.88
Lrrfip1Q3UZ39 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrfip1Q3UZ39 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrfip1Q3UZ39 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Lrrfip1Q3UZ39 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrfip1Q3UZ39 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrfip1Q3UZ39 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.56■□□□□ 0.88
Lrrfip1Q3UZ39 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrfip1Q3UZ39 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrfip1Q3UZ39 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrfip1Q3UZ39 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Lrrfip1Q3UZ39 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Lrrfip1Q3UZ39 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrfip1Q3UZ39 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrfip1Q3UZ39 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrfip1Q3UZ39 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.55■□□□□ 0.88
Lrrfip1Q3UZ39 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Lrrfip1Q3UZ39 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.55■□□□□ 0.88
Lrrfip1Q3UZ39 Gm10653-202ENSMUST00000139570 835 ntBASIC20.55■□□□□ 0.88
Lrrfip1Q3UZ39 Gm22325-201ENSMUST00000158904 308 ntBASIC20.55■□□□□ 0.88
Lrrfip1Q3UZ39 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrfip1Q3UZ39 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrfip1Q3UZ39 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrfip1Q3UZ39 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrfip1Q3UZ39 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrfip1Q3UZ39 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrfip1Q3UZ39 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Lrrfip1Q3UZ39 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.54■□□□□ 0.88
Lrrfip1Q3UZ39 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Lrrfip1Q3UZ39 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrfip1Q3UZ39 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Lrrfip1Q3UZ39 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrfip1Q3UZ39 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrfip1Q3UZ39 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Lrrfip1Q3UZ39 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrfip1Q3UZ39 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrfip1Q3UZ39 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrfip1Q3UZ39 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrrfip1Q3UZ39 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrrfip1Q3UZ39 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms